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Feedback loops in a dynamic network play an important role in determining the dynamics of that network. Through a computational study, in this paper we show that networks with fewer independent negative feedback loops tend to exhibit more…

Quantitative Methods · Quantitative Biology 2009-11-13 Eduardo Sontag , Alan Veliz-Cuba , Reinhard Laubenbacher , Abdul Salam Jarrah

Neural networks storing multiple discrete attractors are canonical models of biological memory. Previously, the dynamical stability of such networks could only be guaranteed under highly restrictive conditions. Here, we derive a theory of…

Disordered Systems and Neural Networks · Physics 2026-01-23 Uri Cohen , Máté Lengyel

Slotted Aloha has been widely adopted in various communication networks. Yet if the transmission probabilities and traffic input rates of transmitters are not properly regulated, their data queues may easily become unstable. For stability…

Networking and Internet Architecture · Computer Science 2024-06-05 Yunshan Yang , Lin Dai

Dynamic perturbation equations are derived for a generic stationary state of an elastic string model -- of the kind appropriate for representing a superconducting cosmic string -- in a flat background. In the case of a circular equilibrium…

High Energy Physics - Theory · Physics 2009-11-10 Brandon Carter , Xavier Martin

The influence of networks topology on collective properties of dynamical systems defined upon it is studied in the thermodynamic limit. A network model construction scheme is proposed where the number of links, the average eccentricity and…

Physics and Society · Physics 2015-05-25 Sarah De Nigris , Xavier Leoncini

In adaptive dynamical networks, the dynamics of the nodes and the edges influence each other. We show that we can treat such systems as a closed feedback loop between edge and node dynamics. Using recent advances on the stability of…

Adaptation and Self-Organizing Systems · Physics 2024-11-25 Nina Kastendiek , Jakob Niehues , Robin Delabays , Thilo Gross , Frank Hellmann

Boolean networks have been successfully used in modelling gene regulatory networks. In this paper we propose a reduction method that reduces the complexity of a Boolean network but keeps dynamical properties and topological features and…

Quantitative Methods · Quantitative Biology 2009-07-06 Alan Veliz-Cuba

Stability of Wardrop equilibria is analyzed for dynamical transportation networks in which the drivers' route choices are influenced by information at multiple temporal and spatial scales. The considered model involves a continuum of…

Dynamical Systems · Mathematics 2015-03-17 Giacomo Como , Ketan Savla , Daron Acemoglu , Munther A. Dahleh , Emilio Frazzoli

The dynamics of a multiplex heterogeneous network of oscillators is studied. Two types of similar models based on the Hodgkin-Huxley formalism are used as the basic elements of the networks. The first type model demonstrates bursting…

Disordered Systems and Neural Networks · Physics 2021-06-03 Nataliya Stankevich

In a first step towards the comprehension of neural activity, one should focus on the stability of the various dynamical states. Even the characterization of idealized regimes, such as a perfectly periodic spiking activity, reveals…

Disordered Systems and Neural Networks · Physics 2014-09-08 Simona Olmi , Antonio Politi , Alessandro Torcini

We study a system of ordinary differential equations in R5 that is used as a model both in population dynamics and in game theory, and is known to exhibit a heteroclinic network consisting in the union of four types of elementary…

Dynamical Systems · Mathematics 2022-06-30 Sofia B. S. D. Castro , Liliana Garrido-da-Silva , Ana Ferreira , Isabel S. Labouriau

Chaotic functions are characterized by sensitivity to initial conditions, transitivity, and regularity. Providing new functions with such properties is a real challenge. This work shows that one can associate with any Boolean network a…

Discrete Mathematics · Computer Science 2011-12-08 J. M. Bahi , J. -F. Couchot , C. Guyeux , A. Richard

The linear stability of stratified two-phase flows in rectangular ducts is studied numerically. The linear stability analysis takes into account all possible infinitesimal three-dimensional disturbances and is carried out by solution of the…

Fluid Dynamics · Physics 2020-04-09 Alexander Gelfgat , Neima Brauner

Combinatorial threshold-linear networks (CTLNs) are a special class of inhibition-dominated TLNs defined from directed graphs. Like more general TLNs, they display a wide variety of nonlinear dynamics including multistability, limit cycles,…

Neurons and Cognition · Quantitative Biology 2022-08-16 Caitlyn Parmelee , Samantha Moore , Katherine Morrison , Carina Curto

We investigate the effect of noise on Random Boolean Networks. Noise is implemented as a probability $p$ that a node does not obey its deterministic update rule. We define two order parameters, the long-time average of the Hamming distance…

Biological Physics · Physics 2009-11-13 Tiago P. Peixoto , Barbara Drossel

Fixed points are fundamental states in any dynamical system. In the case of gene regulatory networks (GRNs) they correspond to stable genes profiles associated to the various cell types. We use Kauffman's approach to model GRNs with random…

Cell Behavior · Quantitative Biology 2012-03-08 Pablo Moisset de Espanés , Axel Osses , Iván Rapaport

Boolean network models of molecular regulatory networks have been used successfully in computational systems biology. The Boolean functions that appear in published models tend to have special properties, in particular the property of being…

Dynamical Systems · Mathematics 2024-07-09 Yuan Li , John O. Adeyeye , David Murrugarra , Boris Aguilar , Reinhard Laubenbacher

We investigate the stability problem for discrete-time stochastic switched linear systems under the specific scenarios where information about the switching patterns and the probability of switches are not available. Our analysis focuses on…

Systems and Control · Computer Science 2018-04-23 Ahmet Cetinkaya , Hideaki Ishii , Tomohisa Hayakawa

We continue our consideration of a class of models describing the reversible dynamics of $N$ Boolean variables, each with $K$ inputs. We investigate in detail the behavior of the Hamming distance as well as of the distribution of orbit…

Disordered Systems and Neural Networks · Physics 2016-08-31 S. N. Coppersmith , Leo P. Kadanoff , Zhitong Zhang

We study the dynamics of randomly connected networks composed of binary Boolean elements and those composed of binary majority vote elements. We elucidate their differences in both sparsely and densely connected cases. The quickness of…

Disordered Systems and Neural Networks · Physics 2013-03-06 Shun-ichi Amari , Hiroyasu Ando , Taro Toyoizumi , Naoki Masuda
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