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Related papers: Stability of Linear Boolean Networks

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We undertake a systematic study of the dynamics of Boolean networks to determine the origin of chaos observed in recent experiments. Networks with nodes consisting of ideal logic gates are known to display either steady states, periodic…

Chaotic Dynamics · Physics 2015-05-14 Hugo L. D. de S. Cavalcante , Daniel J. Gauthier , Joshua E. S. Socolar , Rui Zhang

Oscillatory dynamics are ubiquitous in biological networks. Possible sources of oscillations are well understood in low-dimensional systems, but have not been fully explored in high-dimensional networks. Here we study large networks…

Disordered Systems and Neural Networks · Physics 2016-12-21 Célian Bimbard , Erwan Ledoux , Srdjan Ostojic

We say that an algorithm is stable if small changes in the input result in small changes in the output. This kind of algorithm stability is particularly relevant when analyzing and visualizing time-varying data. Stability in general plays…

Data Structures and Algorithms · Computer Science 2025-03-10 Wouter Meulemans , Bettina Speckmann , Kevin Verbeek , Jules Wulms

One of the characteristic features of genetic networks is their inherent robustness, that is, their ability to retain functionality in spite of the introduction of random errors. In this paper, we seek to better understand how robustness is…

Molecular Networks · Quantitative Biology 2009-04-29 Arnab Bhattacharyya , Bernhard Haeupler

The behavior of the network and its stability are governed by both dynamics of individual nodes as well as their topological interconnections. Attention mechanism as an integral part of neural network models was initially designed for…

Machine Learning · Computer Science 2022-12-20 Nooshin Bahador , Milad Lankarany

For years, we have been building models of gene regulatory networks, where recent advances in molecular biology shed some light on new structural and dynamical properties of such highly complex systems. In this work, we propose a novel…

Adaptation and Self-Organizing Systems · Physics 2009-09-30 Christian Darabos , Marco Tomassini , Mario Giacobini

When is it safe to approximate a complicated random Boolean network (RBN) as a simplified, easier to model RBN? When can static measures of network structure be reliably used to infer the network's dynamics? This simple experiment tests the…

Adaptation and Self-Organizing Systems · Physics 2010-05-20 Shaun Deaton , Seth Frey

The functions of many networked systems in physics, biology or engineering rely on a coordinated or synchronized dynamics of its constituents. In power grids for example, all generators must synchronize and run at the same frequency and…

Adaptation and Self-Organizing Systems · Physics 2017-09-13 Debsankha Manik , Marc Timme , Dirk Witthaut

Continuous-time systems with switch-like behaviour occur in chemical kinetics, gene regulatory networks and neural networks. Networks with hard switching, as a limiting case of smooth sigmoidal switching, retain the richest possible range…

Dynamical Systems · Mathematics 2019-05-10 Roderick Edwards

We study the asymptotic dynamical properties of Boolean networks without local negative cycle. While the properties of Boolean networks without local cycle or without local positive cycle are rather well understood, recent literature raises…

Combinatorics · Mathematics 2016-10-18 Paul Ruet

We solve the problem of identifying (reconstructing) network topology from steady state network measurements. Concretely, given only a data matrix $\mathbf{X}$ where the $X_{ij}$ entry corresponds to flow in edge $i$ in configuration…

Machine Learning · Computer Science 2016-01-22 Aravind Rajeswaran , Shankar Narasimhan

This work primarily focuses on an operator inference methodology aimed at constructing low-dimensional dynamical models based on a priori hypotheses about their structure, often informed by established physics or expert insights. Stability…

Machine Learning · Computer Science 2024-03-04 Igor Pontes Duff , Pawan Goyal , Peter Benner

In this paper we establish a necessary and sufficient stability condition for a stochastic ring network. Such networks naturally appear in a variety of applications within communication, computer, and road traffic systems. They typically…

Probability · Mathematics 2023-09-04 Jaap Storm , Wouter Kager , Michel Mandjes , Sem Borst

The number $\mathcal{N}$ of stable fixed points of locally coupled Kuramoto models depends on the topology of the network on which the model is defined. It has been shown that cycles in meshed networks play a crucial role in determining…

Adaptation and Self-Organizing Systems · Physics 2017-03-27 Robin Delabays , Tommaso Coletta , Philippe Jacquod

We characterize the stability, metastability, and the stationary regime of traffic dynamics in a single-cell uplink wireless system. The traffic is represented in terms of spatial birth-death processes, in which users arrive as a Poisson…

Information Theory · Computer Science 2020-10-15 Ahmad AlAmmouri , Jeffrey G. Andrews , Francois Baccelli

We use fluid limits to explore the (in)stability properties of wireless networks with queue-based random-access algorithms. Queue-based random-access schemes are simple and inherently distributed in nature, yet provide the capability to…

Networking and Internet Architecture · Computer Science 2013-02-26 Javad Ghaderi , Sem Borst , Phil Whiting

Stability with respect to a given scheduling policy has become an important issue for wireless communication systems, but it is hard to prove in particular scenarios. In this paper two simple conditions for stability in broadcast channels…

Networking and Internet Architecture · Computer Science 2009-04-16 Chan Zhou , Gerhard Wunder

In this paper we study the dynamics of nonlinear random walks. While typical random walks on networks consist of standard Markov chains whose static transition probabilities dictate the flow of random walkers through the network, nonlinear…

Pattern Formation and Solitons · Physics 2019-02-25 Per Sebastian Skardal , Sabina Adhikari

The understanding of Boolean automata networks dynamics takes an important place in various domains of computer science such as computability, complexity and discrete dynamical systems. In this paper, we make a step further in this…

Formal Languages and Automata Theory · Computer Science 2014-02-19 Tarek Melliti , Mathilde Noual , Damien Regnault , Sylvain Sené , Jérémy Sobieraj

The connectivity of individual neurons of large neural networks determine both the steady state activity of the network and its answer to external stimulus. Highly diluted random networks have zero activity. We show that increasing the…

Condensed Matter · Physics 2008-02-03 Albert-László Barabási