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With the outbreak of COVID-19, how to mitigate and suppress its spread is a big issue to the government. Department of public health need powerful models to model and predict the trend and scale of such pandemic. And models that could…

Computational Engineering, Finance, and Science · Computer Science 2020-12-08 Wang Pan , Qipu Deng , Jiadong Li , Zhi Wang , Wenwu Zhu

Time-to-event models are commonly used to study associations between risk factors and disease outcomes in the setting of electronic health records (EHR). In recent years, focus has intensified on social determinants of health, highlighting…

Applications · Statistics 2025-11-26 Yueming Shen , Christian Pean , David Dunson , Samuel Berchuck

Spatially explicit models have been widely used in today's mathematical ecology and epidemiology to study persistence and extinction of populations as well as their spatial patterns. Here we extend the earlier work--static dispersal between…

Populations and Evolution · Quantitative Biology 2009-07-01 Quan-Xing Liu , Rong-Hua Wang , Zhen Jin

The integration of empirical data in computational frameworks to model the spread of infectious diseases poses challenges that are becoming pressing with the increasing availability of high-resolution information on human mobility and…

Populations and Evolution · Quantitative Biology 2013-04-24 Anna Machens , Francesco Gesualdo , Caterina Rizzo , Alberto E Tozzi , Alain Barrat , Ciro Cattuto

Mechanistic mathematical models of within-host viral dynamics are tools for understanding how a virus' biology and its interaction with the immune system shape the infectivity of a host. The biology of the process is encoded by the…

Applications · Statistics 2025-12-11 Dylan J. Morris , Lauren Kennedy , Andrew J. Black

Infectious disease models can be of great use for understanding the underlying mechanisms that influence the spread of diseases and predicting future disease progression. Modeling has been increasingly used to evaluate the potential impact…

Applications · Statistics 2019-08-20 Md Mahsin , Rob Deardon , Patrick Brown

Epidemics are inherently stochastic, and stochastic models provide an appropriate way to describe and analyse such phenomena. Given temporal incidence data consisting of, for example, the number of new infections or removals in a given time…

Methodology · Statistics 2024-05-24 Sam A. Whitaker , Andrew Golightly , Colin S. Gillespie , Theodore Kypraios

In this short note we model the region-wise trends of the evolution to COVID-19 infections using a stochastic SIR model. The SIR dynamics are expressed using \textit{It\^o-stochastic differential equations}. We first derive the parameters…

Populations and Evolution · Quantitative Biology 2020-04-17 Ashutosh Simha , R. Venkatesha Prasad , Sujay Narayana

We are facing a common serious issue, infectious diseases, and trying to suppress the spreading of infection. We need less contact with each other to decrease the chance of infection, but this means loss of economic activity, as well. This…

Physics and Society · Physics 2020-05-15 Kenichi Nakazato , Masanori Takano

Networks of contacts capable of spreading infectious diseases are often observed to be highly heterogeneous, with the majority of individuals having fewer contacts than the mean, and a significant minority having relatively very many…

Physics and Society · Physics 2016-12-21 César Parra-Rojas , Thomas House , Alan J. McKane

We propose to use quantum computers to simulate infection spreading in networks. We first show the analogy between the infection distribution and spin-lattice configurations with Ising-type interactions. Then, since the spreading process…

Quantum Physics · Physics 2023-06-16 Xiaoyang Wang , Yinchenguang Lyu , Changyu Yao , Xiao Yuan

We investigate the time-evolution and steady states of the stochastic susceptible-infected-recovered-susceptible(SIRS) epidemic model on one- and two- dimensional lattices. We compare the behavior of this system, obtained from computer…

Populations and Evolution · Quantitative Biology 2009-11-10 Jaewook Joo , Joel L. Lebowitz

Dynamic properties of spreading infection through a heterogeneous population are studied numerically and analytically using a dynamic variant of Watts and Strogatz Small World Network-based stochastic Susceptible-Exposed-Infectious-Removed…

Populations and Evolution · Quantitative Biology 2019-06-28 O. Mosbah , N. Zekri , M. Mokhtari , S. Sahraoui

Quasi-periodicity refers to a pattern in a function where it appears periodic but has evolving amplitudes over time. This is often the case in practical settings such as the modeling of case counts of infectious disease or the carbon…

Methodology · Statistics 2023-05-18 Ziang Zhang , Patrick Brown , Jamie Stafford

This paper investigates the identifiability of a spatial mathematical model of the spread of fast-moving epidemics based on the law of acting masses and diffusion processes. The research algorithm is based on global methods of Sobol…

Optimization and Control · Mathematics 2024-12-30 Olga Krivorotko , Tatiana Zvonareva , Andrei Neverov

We present a computational modeling framework for data-driven simulations and analysis of infectious disease spread in large populations. For the purpose of efficient simulations, we devise a parallel solution algorithm targeting…

Populations and Evolution · Quantitative Biology 2018-02-19 Pavol Bauer , Stefan Engblom , Stefan Widgren

In this paper we study some deterministic mathematical models that seek to explain the expansion of zika virus, as a viral epidemic, using published data for Brazil. SIR type models are proposed and validated using the epidemic data found,…

Populations and Evolution · Quantitative Biology 2023-01-24 Saúl E. Buitrago Boret , René Escalante , Minaya Villasana

To better describe the spread of a disease, we extend a discrete time stochastic SIR-type epidemic model of Tuckwell and Williams. We assume the dependence on time of the number of daily encounters and include a parameter to represent a…

Populations and Evolution · Quantitative Biology 2022-09-30 Mireia Besalú , Giulia Binotto

In this article, we have proposed an epidemic model by using probability cellular automata theory. The essential mathematical features are analyzed with the help of stability theory. We have given an alternative modelling approach for the…

Cellular Automata and Lattice Gases · Physics 2009-05-30 Jin Zhen , Liu Quanxing , Mainul Haque

We study two simple mathematical models of the epidemic. At first, we study the repetitive infection spreading in a simplified SIRS model including the effect of the decay of the acquired immune. The model is an intermediate model of the…

Populations and Evolution · Quantitative Biology 2024-03-13 Hidetsugu Sakaguchi , Keito Yamasaki
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