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The COVID-19 pandemic highlighted the need to improve the modeling, estimation, and prediction of how infectious diseases spread. SEIR-like models have been particularly successful in providing accurate short-term predictions. This study…

Populations and Evolution · Quantitative Biology 2024-12-31 Jorge P. Zubelli , Jennifer Loria , Vinicius V. L. Albani

We present a unifying, tractable approach for studying the spread of viruses causing complex diseases requiring to be modeled using a large number of types (e.g., infective stage, clinical state, risk factor class). We show that recording…

Epidemiological models are best suitable to model an epidemic if the spread pattern is stationary. To deal with non-stationary patterns and multiple waves of an epidemic, we develop a hybrid model encompassing epidemic modeling, particle…

Machine Learning · Computer Science 2024-02-01 Naresh Kumar , Seba Susan

The infections and fatalities due to SARS-CoV-2 virus for cases specific to India have been studied using a deterministic susceptible-exposed-infected-recovered-dead (SEIRD) compartmental model. One of the most significant epidemiological…

Populations and Evolution · Quantitative Biology 2020-06-09 Vishwajeet Jha

The present paper introduces a data-driven framework for describing the time-varying nature of an SIRD model in the context of COVID-19. By embedding a rolling regression in a mixed integer bilevel nonlinear programming problem, our aim is…

Populations and Evolution · Quantitative Biology 2021-03-04 Javier Rubio-Herrero , Yuchen Wang

As the COVID-19 pandemic continues to ravage the world, it is of critical significance to provide a timely risk prediction of the COVID-19 in multi-level. To implement it and evaluate the public health policies, we develop a framework with…

Physics and Society · Physics 2020-12-02 Lingxiao Wang , Tian Xu , Till Hannes Stoecker , Horst Stoecker , Yin Jiang , Kai Zhou

Most COVID-19 studies commonly report figures of the overall infection at a state- or county-level. This aggregation tends to miss out on fine details of virus propagation. In this paper, we analyze a high-resolution COVID-19 dataset in…

Applications · Statistics 2023-03-10 Zheng Dong , Shixiang Zhu , Yao Xie , Jorge Mateu , Francisco J. Rodríguez-Cortés

We introduce an extended generalised logistic growth model for discrete outcomes, in which a network structure can be specified to deal with spatial dependence and time dependence is dealt with using an Auto-Regressive approach. A major…

Since the breakout of coronavirus disease (COVID-19), the computer-aided diagnosis has become a necessity to prevent the spread of the virus. Detecting COVID-19 at an early stage is essential to reduce the mortality risk of the patients. In…

The COVID-19 pandemic has presented unprecedented challenges worldwide, necessitating effective modelling approaches to understand and control its transmission dynamics. In this study, we propose a novel approach that integrates…

Populations and Evolution · Quantitative Biology 2025-01-14 Moein Khalighi , Leo Lahti , Faïçal Ndaïrou , Peter Rashkov , Delfim F. M. Torres

In this work, we have described the mathematical modeling of COVID-19 transmission using fractional differential equations. The mathematical modeling of infectious disease goes back to the 1760s when the famous mathematician Daniel…

Physics and Society · Physics 2023-08-01 Rishi Patel , P. Sainani , M. Brar , R. Patel , X. Li , J. Drozd , F. A. Chishtie , A. Benterki , T. C. Scott , S. R. Valluri

We take up a recently proposed compartmental SEIQR model with delays, ignore loss of immunity in the context of a fast pandemic, extend the model to a network structured on infectivity, and consider the continuum limit of the same with a…

Populations and Evolution · Quantitative Biology 2020-06-24 C. P. Vyasarayani , Anindya Chatterjee

A physics-informed neural network (PINN) embedded with the susceptible-infected-removed (SIR) model is devised to understand the temporal evolution dynamics of infectious diseases. Firstly, the effectiveness of this approach is demonstrated…

Quantitative Methods · Quantitative Biology 2025-04-08 Shuai Han , Lukas Stelz , Horst Stoecker , Lingxiao Wang , Kai Zhou

The life-cycle of a partial differential equation (PDE) solver is often characterized by three development phases: the development of a stable numerical discretization, development of a correct (verified) implementation, and the…

Performance · Computer Science 2017-06-07 Mathias Louboutin , Michael Lange , Felix Herrmann , Navjot Kukreja , Gerard Gorman

This contribution analyzes the COVID-19 outbreak by comparably simple mathematical and numerical methods. The final goal is to predict the peak of the epidemic outbreak per country with a reliable technique. This is done by an algorithm…

Physics and Society · Physics 2020-05-15 Robert Schaback

In this short note we model the region-wise trends of the evolution to COVID-19 infections using a stochastic SIR model. The SIR dynamics are expressed using \textit{It\^o-stochastic differential equations}. We first derive the parameters…

Populations and Evolution · Quantitative Biology 2020-04-17 Ashutosh Simha , R. Venkatesha Prasad , Sujay Narayana

We developed a model and a software package for stochastic simulations of transmission of COVID-19 and other similar infectious diseases, that takes into account contact network structures and geographical distribution of population…

Populations and Evolution · Quantitative Biology 2021-05-19 Alexander Temerev , Liudmila Rozanova , Olivia Keiser , Janne Estill

At the end of April 20, 2020, there were only a few new COVID-19 cases remaining in China, whereas the rest of the world had shown increases in the number of new cases. It is of extreme importance to develop an efficient statistical model…

Methodology · Statistics 2021-03-01 Xiaoping Shi , Meiqian Chen , Yucheng Dong

Severe acute respiratory disease SARS-CoV-2 has had a found impact on public health systems and healthcare emergency response especially with respect to making decisions on the most effective measures to be taken at any given time. As…

Machine Learning · Computer Science 2023-09-19 Charithea Stylianides , Kleanthis Malialis , Panayiotis Kolios

In this paper, we propose a deep learning model to forecast the range of increase in COVID-19 infected cases in future days and we present a novel method to compute equidimensional representations of multivariate time series and…

Computers and Society · Computer Science 2020-08-04 Ankit Ramchandani , Chao Fan , Ali Mostafavi
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