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Graph Neural Networks (GNNs) perform well in community detection and molecule classification. Counterfactual Explanations (CE) provide counter-examples to overcome the transparency limitations of black-box models. Due to the growing…

Machine Learning · Computer Science 2024-06-12 Mario Alfonso Prado-Romero , Bardh Prenkaj , Giovanni Stilo , Fosca Giannotti

In recent years, Graph Neural Networks (GNNs) have become successful in molecular property prediction tasks such as toxicity analysis. However, due to the black-box nature of GNNs, their outputs can be concerning in high-stakes…

Machine Learning · Computer Science 2024-10-22 Yinhan He , Zaiyi Zheng , Patrick Soga , Yaozhen Zhu , yushun Dong , Jundong Li

Counterfactual explanations have been widely studied in explainability, with a range of application dependent methods prominent in fairness, recourse and model understanding. The major shortcoming associated with these methods, however, is…

Machine Learning · Computer Science 2023-12-19 Dan Ley , Saumitra Mishra , Daniele Magazzeni

Graph Neural Networks (GNNs) have been widely deployed in various real-world applications. However, most GNNs are black-box models that lack explanations. One strategy to explain GNNs is through counterfactual explanation, which aims to…

Machine Learning · Computer Science 2024-10-29 Yinhan He , Wendy Zheng , Yaochen Zhu , Jing Ma , Saumitra Mishra , Natraj Raman , Ninghao Liu , Jundong Li

Counterfactual explanations promote explainability in machine learning models by answering the question "how should an input instance be perturbed to obtain a desired predicted label?". The comparison of this instance before and after…

Machine Learning · Computer Science 2022-11-09 Jing Ma , Ruocheng Guo , Saumitra Mishra , Aidong Zhang , Jundong Li

The problem of interpreting the decisions of machine learning is a well-researched and important. We are interested in a specific type of machine learning model that deals with graph data called graph neural networks. Evaluating…

Machine Learning · Computer Science 2022-06-29 Mandeep Rathee , Thorben Funke , Avishek Anand , Megha Khosla

The recent emergence of contrastive learning approaches facilitates the application on graph representation learning (GRL), introducing graph contrastive learning (GCL) into the literature. These methods contrast semantically similar and…

Machine Learning · Computer Science 2022-06-03 Ganqu Cui , Yufeng Du , Cheng Yang , Jie Zhou , Liang Xu , Xing Zhou , Xingyi Cheng , Zhiyuan Liu

As AI models grow more complex, explainability is essential for building trust, yet concept-based counterfactual methods still face a trade-off between expressivity and efficiency. Representing underlying concepts as atomic sets is fast but…

Artificial Intelligence · Computer Science 2026-05-22 Angeliki Dimitriou , Nikolaos Chaidos , Maria Lymperaiou , Giorgos Filandrianos , Giorgos Stamou

The widespread deployment of machine learning systems in critical real-world decision-making applications has highlighted the urgent need for counterfactual explainability methods that operate effectively. Global counterfactual…

Grammatical Error Correction (GEC) faces a critical challenge concerning explainability, notably when GEC systems are designed for language learners. Existing research predominantly focuses on explaining grammatical errors extracted in…

Computation and Language · Computer Science 2025-02-24 Jingheng Ye , Shang Qin , Yinghui Li , Hai-Tao Zheng , Shen Wang , Qingsong Wen

Counterfactual Explanation (CE) techniques have garnered attention as a means to provide insights to the users engaging with AI systems. While extensively researched in domains such as medical imaging and autonomous vehicles, Graph…

Machine Learning · Computer Science 2024-01-12 Mario Alfonso Prado-Romero , Bardh Prenkaj , Giovanni Stilo

Evaluating machine learning (ML) model bias is key to building trustworthy and robust ML systems. Counterfactual Fairness (CF) audits allow the measurement of bias of ML models with a causal framework, yet their conclusions rely on a single…

Machine Learning · Computer Science 2026-01-07 Davi Valério , Chrysoula Zerva , Mariana Pinto , Ricardo Santos , André Carreiro

Counterfactual explanations (CFEs) are an emerging technique under the umbrella of interpretability of machine learning (ML) models. They provide ``what if'' feedback of the form ``if an input datapoint were $x'$ instead of $x$, then an ML…

Machine Learning · Computer Science 2021-06-16 Sahil Verma , John Dickerson , Keegan Hines

Deep graph learning models have demonstrated remarkable capabilities in processing graph-structured data and have been widely applied across various fields. However, their complex internal architectures and lack of transparency make it…

Machine Learning · Computer Science 2026-01-27 Jinlong Hu , Jiacheng Liu

Despite remarkable advances in Large Language Model capabilities, tool retrieval for agent-based systems remains fundamentally limited by reliance on semantic similarity, which fails to capture functional viability. Current methods often…

Machine Learning · Computer Science 2025-10-22 Zongze Wu , Yani Guo , Churong Liang , Runnan Li

Natural language explanations (NLEs) are commonly used to provide plausible free-text explanations of a model's reasoning about its predictions. However, recent work has questioned their faithfulness, as they may not accurately reflect the…

Computation and Language · Computer Science 2025-03-21 Shuzhou Yuan , Jingyi Sun , Ran Zhang , Michael Färber , Steffen Eger , Pepa Atanasova , Isabelle Augenstein

The rise of self-supervised learning, which operates without the need for labeled data, has garnered significant interest within the graph learning community. This enthusiasm has led to the development of numerous Graph Contrastive Learning…

Machine Learning · Computer Science 2024-02-27 Qian Ma , Hongliang Chi , Hengrui Zhang , Kay Liu , Zhiwei Zhang , Lu Cheng , Suhang Wang , Philip S. Yu , Yao Ma

We present a novel approach to tackle explainability of deep graph networks in the context of molecule property prediction tasks, named MEG (Molecular Explanation Generator). We generate informative counterfactual explanations for a…

Quantitative Methods · Quantitative Biology 2020-11-11 Danilo Numeroso , Davide Bacciu

Graph Neural Networks (GNNs) have become increasingly ubiquitous in numerous applications and systems, necessitating explanations of their predictions, especially when making critical decisions. However, explaining GNNs is challenging due…

Machine Learning · Computer Science 2022-10-21 Tien-Cuong Bui , Van-Duc Le , Wen-syan Li , Sang Kyun Cha

Counterfactual explanations offer an intuitive way to interpret graph neural networks (GNNs) by identifying minimal changes that alter a model's prediction, thereby answering "what must differ for a different outcome?". In this work, we…

Machine Learning · Computer Science 2026-02-09 Yu Zhang , Sean Bin Yang , Arijit Khan , Cuneyt Gurcan Akcora
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