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Multi-modal learning integrating medical images and tabular data has significantly advanced clinical decision-making in recent years. Self-Supervised Learning (SSL) has emerged as a powerful paradigm for pretraining these models on…

Computer Vision and Pattern Recognition · Computer Science 2025-12-17 Yibing Fu , Yunpeng Zhao , Zhitao Zeng , Cheng Chen , Yueming Jin

Visual quality measures (VQMs) are designed to support analysts by automatically detecting and quantifying patterns in visualizations. We propose a new VQM for visual grouping patterns in scatterplots, called ClustML, which is trained on…

Human-Computer Interaction · Computer Science 2024-05-02 Mostafa M. Abbas , Ehsan Ullah , Abdelkader Baggag , Halima Bensmail , Michael Sedlmair , Michaël Aupetit

Large language models (LLMs) have demonstrated remarkable advancements, primarily due to their capabilities in modeling the hidden relationships within text sequences. This innovation presents a unique opportunity in the field of life…

Genomics · Quantitative Biology 2024-12-25 Cong Li , Qingqing Long , Yuanchun Zhou , Meng Xiao

In this work, we devote ourselves to the challenging task of Unsupervised Multi-view Representation Learning (UMRL), which requires learning a unified feature representation from multiple views in an unsupervised manner. Existing UMRL…

Machine Learning · Computer Science 2023-03-09 Yiyang Zhou , Qinghai Zheng , Shunshun Bai , Jihua Zhu

The analysis of data streams has received considerable attention over the past few decades due to sensors, social media, etc. It aims to recognize patterns in an unordered, infinite, and evolving stream of observations. Clustering this type…

Machine Learning · Computer Science 2022-01-14 Mohammed Oualid Attaoui , Hanene Azzag , Mustapha Lebbah , Nabil Keskes

In complex multivariate data sets, different features usually include diverse associations with different variables, and different variables are associated within different regions. Therefore, exploring the associations between variables…

Computer Vision and Pattern Recognition · Computer Science 2019-08-20 Xiangyang He , Yubo Tao , Qirui Wang , Hai Lin

Over the past few years, technological advances have allowed for measurement of omics data at the cell level, creating a new type of data generally referred to as single-cell (sc) omics. On the other hand, the so-called spatial omics are a…

Image clustering is one of the crucial techniques in multimedia analytics and knowledge discovery. Recently, the Deep clustering method (DC), characterized by its ability to perform feature learning and cluster assignment jointly, surpasses…

Computer Vision and Pattern Recognition · Computer Science 2026-04-07 Haiyang Zheng , Ruilin Zhang , Hongpeng Wang

Similarity-driven multi-view linear reconstruction (SiMLR) is an algorithm that exploits inter-modality relationships to transform large scientific datasets into smaller, more well-powered and interpretable low-dimensional spaces. SiMLR…

Machine Learning · Statistics 2021-01-22 Brian B. Avants , Nicholas J. Tustison , James R. Stone

With advanced imaging, sequencing, and profiling technologies, multiple omics data become increasingly available and hold promises for many healthcare applications such as cancer diagnosis and treatment. Multimodal learning for integrative…

Genomics · Quantitative Biology 2022-12-20 Sina Tabakhi , Mohammod Naimul Islam Suvon , Pegah Ahadian , Haiping Lu

In this paper, we explore the problem of deep multi-view subspace clustering framework from an information-theoretic point of view. We extend the traditional information bottleneck principle to learn common information among different views…

Machine Learning · Computer Science 2023-03-22 Shiye Wang , Changsheng Li , Yanming Li , Ye Yuan , Guoren Wang

Diverse applications - particularly in tumour subtyping - have demonstrated the importance of integrative clustering techniques for combining information from multiple data sources. Cluster-Of-Clusters Analysis (COCA) is one such approach…

Machine Learning · Statistics 2020-08-05 Alessandra Cabassi , Paul D. W. Kirk

In an era where social media platforms abound, individuals frequently share images that offer insights into their intents and interests, impacting individual life quality and societal stability. Traditional computer vision tasks, such as…

Computer Vision and Pattern Recognition · Computer Science 2025-04-28 Yin Tang , Jiankai Li , Hongyu Yang , Xuan Dong , Lifeng Fan , Weixin Li

Single-cell omics technologies have transformed our understanding of cellular diversity by enabling high-resolution profiling of individual cells. However, the unprecedented scale and heterogeneity of these datasets demand robust frameworks…

Single-Cell RNA sequencing (scRNA-seq) measurements have facilitated genome-scale transcriptomic profiling of individual cells, with the hope of deconvolving cellular dynamic changes in corresponding cell sub-populations to better…

Genomics · Quantitative Biology 2021-04-06 Seyednami Niyakan , Ehsan Hajiramezanali , Shahin Boluki , Siamak Zamani Dadaneh , Xiaoning Qian

Feature selection techniques are essential for high-dimensional data analysis. In the last two decades, their popularity has been fuelled by the increasing availability of high-throughput biomolecular data where high-dimensionality is a…

Quantitative Methods · Quantitative Biology 2024-01-18 Pengyi Yang , Hao Huang , Chunlei Liu

Precision medicine fundamentally aims to establish causality between dysregulated biochemical mechanisms and cancer subtypes. Omics-based cancer subtyping has emerged as a revolutionary approach, as different level of omics records the…

Genomics · Quantitative Biology 2023-08-25 Ziwei Yang , Zheng Chen , Yasuko Matsubara , Yasushi Sakurai

Label-free single-cell imaging offers a scalable, non-invasive alternative to fluorescence-based cytometry, yet inferring molecular phenotypes directly from bright-field morphology remains challenging. We present a unified Deep Learning…

Computer Vision and Pattern Recognition · Computer Science 2026-05-15 Saqib Nazir , Ardhendu Behera

Quantum Machine Learning (QML) is a red-hot field that brings novel discoveries and exciting opportunities to resolve, speed up, or refine the analysis of a wide range of computational problems. In the realm of biomedical research and…

Machine Learning · Computer Science 2024-10-04 Mandeep Kaur Saggi , Amandeep Singh Bhatia , Mensah Isaiah , Humaira Gowher , Sabre Kais

Cross-modal retrieval has become a highlighted research topic for retrieval across multimedia data such as image and text. A two-stage learning framework is widely adopted by most existing methods based on Deep Neural Network (DNN): The…

Multimedia · Computer Science 2017-08-09 Yuxin Peng , Jinwei Qi , Xin Huang , Yuxin Yuan
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