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Related papers: Bacteriophage effect on parasitism resistance

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Bacteriophages are viruses infecting bacteria and archaea. Many phage species cause infections which lead to the certain death of the infected prokaryotic host cell and the release of a large batch of phage progeny, yet they have been able…

Populations and Evolution · Quantitative Biology 2019-12-24 Matthias M. Fischer

The inhabitants of the bush lupine in coastal California have been the subject of scientific scrutiny in recent years. Observations of a host-parasitoid interaction in the shrub's foliage, in which victims are significantly less motile than…

Populations and Evolution · Quantitative Biology 2008-09-01 Roy Werner Wright

We investigate a stochastic individual-based model for the population dynamics of host-virus systems where the microbial hosts may transition into a dormant state upon contact with virions, thus evading infection. Such a contact-mediated…

Populations and Evolution · Quantitative Biology 2022-11-07 Jochen Blath , András Tóbiás

We present a model for host-parasite dynamics which incorporates both vertical and horizontal transmission as well as spatial structure. Our model consists of stacked contact processes (CP), where the dynamics of the host is a simple CP on…

Biological Physics · Physics 2015-05-26 Steven J. Court , Richard A. Blythe , Rosalind J. Allen

Antagonistic coevolution between hosts and parasites can have a major impact on host population structures, and hence on the evolution of social traits. Using stochastic modelling techniques in the context of bacteria-virus interactions, we…

Populations and Evolution · Quantitative Biology 2012-10-09 Benjamin J. Z. Quigley , Diana García López , Angus Buckling , Alan J. McKane , Sam P. Brown

Bacteria and archaea have evolved an adaptive, heritable immune system that recognizes and protects against viruses or plasmids. This system, known as the CRISPR-Cas system, allows the host to recognize and incorporate short foreign DNA or…

Populations and Evolution · Quantitative Biology 2014-01-21 Pu Han , Liang Ren Niestemski , Jeffrey E. Barrick , Michael W. Deem

Clustered Regularly Interspaced Short Palindromic Repeats (CRISPR), linked with CRISPR associated (CAS) genes, play a profound role in the interactions between phage and their bacterial hosts. It is now well understood that CRISPR-CAS…

Populations and Evolution · Quantitative Biology 2016-03-18 Qasim Ali , Lindi Wahl

The intestinal microbiota plays important roles in digestion and resistance against entero-pathogens. As with other ecosystems, its species composition is resilient against small disturbances but strong perturbations such as antibiotics can…

Quantitative Methods · Quantitative Biology 2015-06-04 Vanni Bucci , Serena Bradde , Giulio Biroli , Joao B. Xavier

Discrete-time models are the traditional approach for capturing population dynamics of a host-parasitoid system. Recent work has introduced a semi-discrete framework for obtaining model update functions that connect host-parasitoid…

Populations and Evolution · Quantitative Biology 2015-03-09 Brooks Emerick , Abhyudai Singh

Cotesia typhae is an eastern African endoparasitoid braconid wasp that targets the larval stage of the lepidopteran stem borer, Sesamia nonagrioides, a maize crop pest in Europe. The French host population is partially resistant to the…

In host-pathogen interactions, often the host (attacked organism) defends itself by some toxic compound and the parasite, in turn, responds by producing an enzyme that inactivates that compound. In some cases, the host can respond by…

Subcellular Processes · Quantitative Biology 2019-07-11 Stefan Schuster , Jan Ewald , Thomas Dandekar , Sybille Dühring

In the studies of dynamics of pathogens and their interactions with a host immune system, an important role is played by the structure of antigenic variants associated with a pathogen. Using the example of a model of antigenic variation in…

Chaotic Dynamics · Physics 2013-02-22 K. B. Blyuss

Host-parasitoid population dynamics is often probed using a semi-discrete/hybrid modeling framework. Here, the update functions in the discrete-time model connecting year-to-year changes in the population densities are obtained by solving…

Populations and Evolution · Quantitative Biology 2020-01-01 Brooks Emerick , Abhyudai Singh

Photosymbiosis is one of the most important evolutionary trajectories, resulting in the chloroplast and the subsequent development of all complex photosynthetic organisms. The ciliate Paramecium bursaria and the alga Chlorella have a well…

Populations and Evolution · Quantitative Biology 2015-12-08 Andrew Dean , Ewan Minter , Megan Sorenson , Christopher Lowe , Duncan Cameron , Michael Brockurst , A. Jamie Wood

We introduce a model called Host-Pathogen game for studying biological competitions. Notably, we focus on the invasive dynamics of external agents, like bacteria, within a host organism. The former are mapped to a population of defectors…

Populations and Evolution · Quantitative Biology 2018-09-03 Marco Alberto Javarone

Bacteria develop resistance to antibiotics through various mechanisms, with the specific mechanism depending on the drug-bacteria pair. It remains unclear, however, which resistance mechanism best supports favorable treatment outcomes,…

Populations and Evolution · Quantitative Biology 2025-11-06 Ailin Zhang , Shigui Ruan , Xi Huo

Humans, domestic animals, orchard crops, and ornamental plants are commonly treated with antibiotics in response to bacterial infection. By curing infectious individuals, antibiotic therapy might limit the spread of contagious disease among…

Populations and Evolution · Quantitative Biology 2020-11-04 Thomas Caraco

The canonical view of the interactions between viruses and their microbial hosts presumes that changes in host and virus fate require the initiation of infection of a host by a virus. That is, first virus particles diffuse randomly outside…

Populations and Evolution · Quantitative Biology 2015-04-02 Hayriye Gulbudak , Joshua S. Weitz

Apparent competition between species is believed to be one of the principle driving forces that structure ecological communities, although the precise mecha nisms have yet to be characterized. Here we develop a model system that isolates…

Populations and Evolution · Quantitative Biology 2007-05-23 Jaewook Joo , Michelle Gunny , Marisa Cases , Peter Hudson , Reka Albert , Eric Harvill

We present a two-species population model in a well-mixed environment where the dynamics involves, in addition to birth and death, changes due to environmental factors and inter-species interactions. The novel dynamical components are…

Biological Physics · Physics 2020-09-17 J. J. Dong , J. D. Russo , K. Sampson
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