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Despite the superiority of convolutional neural networks demonstrated in time series modeling and forecasting, it has not been fully explored on the design of the neural network architecture and the tuning of the hyper-parameters. Inspired…

Machine Learning · Computer Science 2022-02-14 Xinze Zhang , Kun He , Yukun Bao

With the fast evolution of high-throughput technology, longitudinal gene expression experiments have become affordable and increasingly common in biomedical fields. Generalized estimating equation (GEE) approach is a widely used statistical…

Applications · Statistics 2020-08-13 Suyan Tian , Chi Wang , Mayte Suarez-Farinas

Constrained Local Models (CLMs) are a well-established family of methods for facial landmark detection. However, they have recently fallen out of favor to cascaded regression-based approaches. This is in part due to the inability of…

Computer Vision and Pattern Recognition · Computer Science 2017-07-28 Amir Zadeh , Tadas Baltrušaitis , Louis-Philippe Morency

Electrochemical Impedance Spectroscopy (EIS) and Equivalent Circuit Models (ECMs) are widely used to characterize the impedance and estimate parameters of electrochemical systems such as batteries. We use a generic ECM with ten parameters…

Systems and Control · Electrical Eng. & Systems 2024-03-18 Vladimir Sovljanski , Mario Paolone

We propose an evolution strategies-based algorithm for estimating gradients in unrolled computation graphs, called ES-Single. Similarly to the recently-proposed Persistent Evolution Strategies (PES), ES-Single is unbiased, and overcomes…

Machine Learning · Computer Science 2023-04-24 Paul Vicol , Zico Kolter , Kevin Swersky

Bayesian variable selection regression (BVSR) is able to jointly analyze genome-wide genetic datasets, but the slow computation via Markov chain Monte Carlo (MCMC) hampered its wide-spread usage. Here we present a novel iterative method to…

Computation · Statistics 2018-07-31 Quan Zhou , Yongtao Guan

The classification of genetic variants, particularly Variants of Uncertain Significance (VUS), poses a significant challenge in clinical genetics and precision medicine. Large Language Models (LLMs) have emerged as transformative tools in…

This paper proposes a hybrid basis function construction method (GP-RVM) for Symbolic Regression problem, which combines an extended version of Genetic Programming called Kaizen Programming and Relevance Vector Machine to evolve an optimal…

Neural and Evolutionary Computing · Computer Science 2018-08-28 Hossein Izadi Rad , Ji Feng , Hitoshi Iba

This work establishes regularity conditions for consistency and asymptotic normality of the multiple parameter maximum likelihood estimator(MLE) from censored data, where the censoring mechanism is in the form of $1$-bit measurements. The…

Statistics Theory · Mathematics 2025-02-11 Jaimin Shah , Martina Cardone , Cynthia Rush , Alex Dytso

Next-generation sequencing techniques have facilitated a large scale analysis of human genetic variation. Despite the advances in sequencing speeds, the computational discovery of structural variants is not yet standard. It is likely that…

Recently, there has been a resurgence of interest in rigorous algorithms for the inference of cancer progression from genomic data. The motivations are manifold: (i) growing NGS and single cell data from cancer patients, (ii) need for novel…

Machine Learning · Computer Science 2016-02-25 Daniele Ramazzotti

Deep convolutional neural networks (CNNs) with strong expressive ability have achieved impressive performances on single image super-resolution (SISR). However, their excessive amounts of convolutions and parameters usually consume high…

Image and Video Processing · Electrical Eng. & Systems 2020-07-22 Chunwei Tian , Ruibin Zhuge , Zhihao Wu , Yong Xu , Wangmeng Zuo , Chen Chen , Chia-Wen Lin

Gamma-ray bursts (GRBs) are challenging to identify due to their transient nature, complex temporal profiles, and limited observational datasets. We address this with a one-dimensional convolutional neural network integrated with an…

Real-world image super-resolution (Real-ISR) must handle complex degradations and inherent reconstruction ambiguities. While generative models have improved perceptual quality, a key trade-off remains with computational cost. One-step…

Computer Vision and Pattern Recognition · Computer Science 2025-10-23 Yun Kai Zhuang

Generalized linear models (GLMs) arguably represent the standard approach for statistical regression beyond the Gaussian likelihood scenario. When Bayesian formulations are employed, the general absence of a tractable posterior distribution…

Computation · Statistics 2024-07-03 Niccolò Anceschi , Augusto Fasano , Beatrice Franzolini , Giovanni Rebaudo

Deploying generative machine learning techniques to generate novel chemical structures based on molecular fingerprint representation has been well established in molecular design. Typically, sequential learning (SL) schemes such as hidden…

Biomolecules · Quantitative Biology 2022-04-07 Mohammad Sajjad Ghaemi , Karl Grantham , Isaac Tamblyn , Yifeng Li , Hsu Kiang Ooi

Spatial Transcriptomics enables mapping of gene expression within its native tissue context, but current platforms measure only a limited set of genes due to experimental constraints and excessive costs. To overcome this, computational…

Genomics · Quantitative Biology 2025-11-20 Amit Kumar , Maninder Kaur , Raghvendra Mall , Sukrit Gupta

Convolutional networks are at the core of most state-of-the-art computer vision solutions for a wide variety of tasks. Since 2014 very deep convolutional networks started to become mainstream, yielding substantial gains in various…

Computer Vision and Pattern Recognition · Computer Science 2015-12-14 Christian Szegedy , Vincent Vanhoucke , Sergey Ioffe , Jonathon Shlens , Zbigniew Wojna

RNA sequencing (RNA-seq) is the conventional genome-scale approach used to capture the expression levels of all detectable genes in a biological sample. This is now regularly used for population-based studies designed to identify genetic…

Genomics · Quantitative Biology 2026-05-25 Christopher Thron , Farhad Jafari

A novel sequential inferential method for Bayesian dynamic generalised linear models is presented, addressing both univariate and multivariate $k$-parametric exponential families. It efficiently handles diverse responses, including…

Methodology · Statistics 2025-01-15 Mariane Branco Alves , Helio S. Migon , Silvaneo V. Santos , Raíra Marotta