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Phylogenetic diversity is a measure for describing how much of an evolutionary tree is spanned by a subset of species. If one applies this to the (unknown) subset of current species that will still be present at some future time, then this…

Subcellular Processes · Quantitative Biology 2009-09-29 Beata Faller , Fabio Pardi , Mike Steel

The purpose of this paper is to analyze the mechanism for the interplay of deterministic and stochastic models for contagious diseases. Deterministic models for contagious diseases are prone to predict global stability. Small natural birth…

Populations and Evolution · Quantitative Biology 2022-06-17 Torsten Lindström

The present paper is devoted to the study of the long term dynamics of diffusion processes modelling a single species that experiences both demographic and environmental stochasticity. In our setting, the long term dynamics of the diffusion…

Probability · Mathematics 2024-07-10 Alexandru Hening , Weiwei Qi , Zhongwei Shen , Yingfei Yi

We investigate the phenomenology emerging from a 2-species dynamics under the scenario of a quasi-neutral competition within a metapopulation framework. We employ stochastic and deterministic approaches, namely spatially-constrained…

Populations and Evolution · Quantitative Biology 2021-02-05 Marcelo A. Pires , Nuno Crokidakis , Silvio M. Duarte Queirós

The nonlocal Fisher equation is a diffusion-reaction equation with a nonlocal quadratic competition, which describes the reaction between distant individuals. This equation arises in evolutionary biological systems, where the arena for the…

Pattern Formation and Solitons · Physics 2018-04-25 Yehuda A. Ganan , David A. Kessler

We study a class of free boundary systems with nonlocal diffusion, which are natural extensions of the corresponding free boundary problems of reaction diffusion systems. As before the free boundary represents the spreading front of the…

Analysis of PDEs · Mathematics 2019-07-11 Yihong Du , Mingxin Wang , Meng Zhao

We consider a stochastic version of the basic predator-prey differential equation model. The model, which contains a parameter \omega which represents the number of individuals for one unit of prey -- If x denotes the quantity of prey in…

Dynamical Systems · Mathematics 2011-11-29 Fabien Campillo , Claude Lobry

This paper studies spatial patterns formed by proximate population migration driven by real wage gradients and other idiosyncratic factors. The model consists of a tractable core-periphery model incorporating a quasi-linear log utility…

Theoretical Economics · Economics 2025-07-23 Kensuke Ohtake

The survival of populations hinges on their ability to offset local extinctions through new colonizations. The dispersal area ($A$) plays a crucial role in this process, as it determines the probability of finding colonizable vacant sites.…

Populations and Evolution · Quantitative Biology 2026-01-05 Róbert Juhász , Igor D. Kovács , Beáta Oborny

In this paper, we study the asymptotic behavior of the solutions of nonlocal bistable reaction-diffusion equations starting from compactly supported initial conditions. Depending on the relationship between the nonlinearity, the interaction…

Analysis of PDEs · Mathematics 2022-01-19 Christophe Besse , Alexandre Capel , Grégory Faye , Guilhem Fouilhé

Self-organisation of individuals within large collectives occurs throughout biology. Mathematical models can help elucidate the individual-level mechanisms behind these dynamics, but analytical tractability often comes at the cost of…

This paper is devoted to the study of persistence and extinction of a species modeled by nonlocal dispersal evolution equations in moving habitats with moving speed $c$. It is shown that the species becomes extinct if the moving speed $c$…

Dynamical Systems · Mathematics 2019-06-20 Patrick De Leenheer , Wenxian Shen , Aijun Zhang

In order to understand how nonlocal diffusion and pulse intervention affect dynamics of species, we focus on an age-structured nonlocal diffusion model in moving and heterogeneous environment, where nonlocal diffusion describes the long…

Analysis of PDEs · Mathematics 2024-07-16 Haiyan Xu , Carlos Alberto Santos , Mengyun Zhang , Zhigui Lin

The random diffusion model is a continuum model for a conserved scalar density field driven by diffusive dynamics where the bare diffusion coefficient is density dependent. We generalize the model from one with a sharp wavenumber cutoff to…

Soft Condensed Matter · Physics 2015-03-13 David D. McCowan , Gene F. Mazenko

Diffusion is a fundamental physical phenomenon with critical applications in fields such as metallurgy, cell biology, and population dynamics. While standard diffusion is well-understood, anomalous diffusion often requires complex non-local…

Statistical Mechanics · Physics 2026-01-16 Gabriel Barreiro , Vladimir Pérez-Veloz

The behaviour is investigated of solutions to a diffusion equation on the real line with nonlocal and singular reaction term, i.e., given by a Dirac source or sink at the origin. It gives a simplified representation of for example a control…

Analysis of PDEs · Mathematics 2026-05-19 Xiao Yang , Qiyao Peng , Sander C. Hille

Many biological systems are governed by difference equations and exhibit discrete-time dynamics. Examples include the size of a population when generations are non-overlapping, and the incidence of a disease when infections are recorded at…

Populations and Evolution · Quantitative Biology 2025-09-25 Shuyun Jiao , David Waxman

Individual-based models of chemical or biological dynamics usually consider individual entities diffusing in space and performing a birth-death type dynamics. In this work we study the properties of a model in this class where the birth…

Statistical Mechanics · Physics 2009-11-11 Emilio Hernandez-Garcia , Cristobal Lopez

Diffusion models have emerged as a powerful class of generative models, achieving state-of-the-art results in continuous data domains such as image and video generation. Their core mechanism involves a forward diffusion process that…

Computation and Language · Computer Science 2025-07-10 Ashen Weligalle

Population genetics struggles to model extinction; standard models track the relative rather than absolute fitness of genotypes, while the exceptions describe only the short-term transition from imminent doom to evolutionary rescue. But…

Populations and Evolution · Quantitative Biology 2017-02-20 Jason Bertram , Kevin Gomez , Joanna Masel