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Many measurement modalities which perform imaging by probing an object pixel-by-pixel, such as via Photoacoustic Microscopy, produce a multi-dimensional feature (typically a time-domain signal) at each pixel. In principle, the many degrees…

Computer Vision and Pattern Recognition · Computer Science 2022-08-10 Nicholas Pellegrino , Paul Fieguth , Parsin Haji Reza

This paper introduces a novel K-means clustering algorithm, an advancement on the conventional Big-means methodology. The proposed method efficiently integrates parallel processing, stochastic sampling, and competitive optimization to…

Machine Learning · Computer Science 2024-03-28 Rustam Mussabayev , Ravil Mussabayev

Phylogenetic trees (i.e. evolutionary trees, additive trees or X-trees) play a key role in the processes of modeling and representing species evolution. Genome evolution of a given group of species is usually modeled by a species…

Populations and Evolution · Quantitative Biology 2023-01-03 Vladimir Makarenkov , Gayane S. Barseghyan , Nadia Tahiri

This study presents the approach to analyzing the evolution of an arbitrary complex system whose behavior is characterized by a set of different time-dependent factors. The key requirement for these factors is only that they must contain an…

Data Analysis, Statistics and Probability · Physics 2020-12-01 Anatolii V. Mokshin , Vladimir V. Mokshin , Diana A. Mirziyarova

Clustering is one of the most fundamental and wide-spread techniques in exploratory data analysis. Yet, the basic approach to clustering has not really changed: a practitioner hand-picks a task-specific clustering loss to optimize and fit…

Machine Learning · Computer Science 2019-11-01 Yibo Jiang , Nakul Verma

It is often of interest to perform clustering on longitudinal data, yet it is difficult to formulate an intuitive model for which estimation is computationally feasible. We propose a model-based clustering method for clustering objects that…

Methodology · Statistics 2020-05-19 Daniel K. Sewell , Yuguo Chen , William Bernhard , Tracy Sulkin

Many cellular responses to surrounding cues require temporally concerted transcriptional regulation of multiple genes. In prokaryotic cells, a single-input-module motif with one transcription factor regulating multiple target genes can…

Subcellular Processes · Quantitative Biology 2019-06-19 Jingyu Zhang , Hengyu Chen , Ruoyan Li , David A. Taft , Guang Yao , Fan Bai , Jianhua Xing

This paper presents a novel method for clustering surfaces. The proposal involves first using basis functions in a tensor product to smooth the data and thus reduce the dimension to a finite number of coefficients, and then using these…

Methodology · Statistics 2021-02-04 Adriano Zanin Zambom , Qing Wang , Ronaldo Dias

We consider the problem of data clustering with unidentified feature quality and when a small amount of labelled data is provided. An unsupervised sparse clustering method can be employed in order to detect the subgroup of features…

Machine Learning · Computer Science 2020-10-20 Avgoustinos Vouros , Eleni Vasilaki

We propose a model-based clustering algorithm for a general class of functional data for which the components could be curves or images. The random functional data realizations could be measured with error at discrete, and possibly random,…

Machine Learning · Statistics 2022-03-14 Steven Golovkine , Nicolas Klutchnikoff , Valentin Patilea

Many clustering algorithms exist that estimate a cluster centroid, such as K-means, K-medoids or mean-shift, but no algorithm seems to exist that clusters data by returning exactly K meaningful modes. We propose a natural definition of a…

Machine Learning · Computer Science 2013-04-25 Miguel Á. Carreira-Perpiñán , Weiran Wang

Clustering categorical data is an integral part of data mining and has attracted much attention recently. In this paper, we present k-histogram, a new efficient algorithm for clustering categorical data. The k-histogram algorithm extends…

Artificial Intelligence · Computer Science 2007-05-23 Zengyou He , Xiaofei Xu , Shengchun Deng , Bin Dong

Micro-panel data are collected and analysed in many research and industry areas. Cluster analysis of micro-panel data is an unsupervised learning exploratory method identifying subgroup clusters in a data set which include homogeneous…

Machine Learning · Statistics 2018-07-17 Lukas Sobisek , Maria Stachova , Jan Fojtik

In this paper, a novel feature selection approach for supervised interval valued features is proposed. The proposed approach takes care of selecting the class specific features through interval K-Means clustering. The kernel of K-Means…

Computer Vision and Pattern Recognition · Computer Science 2017-06-01 D. S. Guru , N. Vinay Kumar

We propose a novel methodology for feature screening in clustering massive datasets, in which both the number of features and the number of observations can potentially be very large. Taking advantage of a fusion penalization based convex…

Methodology · Statistics 2017-10-05 Trambak Banerjee , Gourab Mukherjee , Peter Radchenko

We propose a method for detecting differential gene expression that exploits the correlation between genes. Our proposal averages the univariate scores of each feature with the scores in correlation neighborhoods. In a number of real and…

Statistics Theory · Mathematics 2007-06-13 Robert Tibshirani , Larry Wasserman

We develop a novel clustering method for distributional data, where each data point is regarded as a probability distribution on the real line. For distributional data, it has been challenging to develop a clustering method that utilizes…

Methodology · Statistics 2025-06-24 Ryo Okano , Masaaki Imaizumi

In Tri-clustering, a sub-matrix is being created, which exhibit highly similar behavior with respect to genes, conditions and time-points. In this technique, genes with same expression values are discovered across some fragment of time…

Neural and Evolutionary Computing · Computer Science 2018-05-15 Shreya Mishra , Swati Vipsita

Cluster-randomized experiments are widely used due to their logistical convenience and policy relevance. To analyze them properly, we must address the fact that the treatment is assigned at the cluster level instead of the individual level.…

Methodology · Statistics 2021-08-06 Fangzhou Su , Peng Ding

Clustering is widely used in unsupervised learning to find homogeneous groups of observations within a dataset. However, clustering mixed-type data remains a challenge, as few existing approaches are suited for this task. This study…

Machine Learning · Statistics 2025-11-26 Badih Ghattas , Alvaro Sanchez San-Benito