Related papers: Knot probabilities in equilateral random polygons
Building on the approach of Bar-Natan and Van der Veen to universal knot invariants using (perturbed) Gaussian functions, we develop a Gaussian model to compute the Alexander polynomial $\Delta_{\mathcal{K}}(T)$ of an oriented knot…
Inspired by how certain proteins "sense" knots and entanglements in DNA molecules, here we ask if there exist local geometric features that may be used as a read-out of the underlying topology of generic polymers. We perform molecular…
Knot theory is the Mathematical study of knots. In this paper we have studied the Composition of two knots. Knot theory belongs to Mathematical field of Topology, where the topological concepts such as topological spaces, homeomorphisms,…
We show that, for any prime p, a knot K in the 3-sphere is determined by its p-fold cyclic unbranched covering. We also investigate when the m-fold cyclic unbranched covering of a knot coincides with the n-fold cyclic unbranched covering of…
We have evaluated a universal ratio between diffusion constants of the ring polymer with a given knot $K$ and a linear polymer with the same molecular weight in solution through the Brownian dynamics under hydrodynamic interaction. The…
We find a power law for the number of knot-monomers with an exponent $0.39 \pm0.13$ in agreement with previous simulations. For the average size of a knot we also obtain a power law $N_m=2.56\cdot N^{0.20\pm0.04}$. We further present data…
We analyze the connections between the mathematical theory of knots and quantum physics by addressing a number of algorithmic questions related to both knots and braid groups. Knots can be distinguished by means of `knot invariants', among…
Semiflexible polymer models are widely used as a paradigm to understand structural phases in biomolecules including folding of proteins. Since stable knots are not so common in real proteins, the existence of stable knots in semiflexible…
Two knots in three-space are S-equivalent if they are indistinguishable by Seifert matrices. We show that S-equivalence is generated by the doubled-delta move on knot diagrams. It follows as a corollary that a knot has trivial Alexander…
Spontaneous formation of knots in long polymers at equilibrium is inevitable but becomes rare in sufficiently short chains. Here, we show that knotting and knot complexity increase by orders of magnitude in diblock polymers with a fraction…
Using a combination of the replica-exchange Monte Carlo algorithm and the multicanonical method, we investigate the influence of bending stiffness on the conformational phases of a bead-stick homopolymer model and present the pseudo-phase…
We give an explicit formula of the Alexander polynomial of the link obtained by adding an arbitrary number of full twists to positively oriented parallel n-strands in terms of the Alexander polynomials of the links obtained by adding…
We study the probability that a random polynomial with integer coefficients is reducible when factored over the rational numbers. Using computer-generated data, we investigate a number of different models, including both monic and non-monic…
The instanton Floer homology of a knot in the three-sphere is a vector space with a canonical mod 2 grading. It carries a distinguished endomorphism of even degree,arising from the 2-dimensional homology class represented by a Seifert…
Given a knot K in an Euclidean space E and a finite dimensional space V of smooth functions on K, we express the expected number of critical points of a random function in V in terms of an integral-geometric invariant of K and V. When V…
We extend knot contact homology to a theory over the ring $\mathbb{Z}[\lambda^{\pm 1},\mu^{\pm 1}]$, with the invariant given topologically and combinatorially. The improved invariant, which is defined for framed knots in $S^3$ and can be…
The representation of knots by petal diagrams (Adams et al. 2012) naturally defines a sequence of distributions on the set of knots. In this article we establish some basic properties of this randomized knot model. We prove that in the…
This paper explores the problem of unknotting closed braids and classical knots in mathematical knot theory. We apply evolutionary computation methods to learn sequences of moves that simplify knot diagrams, and show that this can be…
Geometric interpretations of some virtual knot invariants are given in terms of invariants of links in $\mathbb{S}^3$. Alexander polynomials of almost classical knots are shown to be specializations of the multi-variable Alexander…
This is the first in a series of papers where we will derive invariants of three-manifolds and framed knots in them from the geometry of a manifold pseudotriangulation put in some way in a four-dimensional Euclidean space. Thus, the…