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More than ninety percent of published Jupyter notebooks do not state dependencies on external packages. This makes them non-executable and thus hinders reproducibility of scientific results. We present SnifferDog, an approach that 1)…

Software Engineering · Computer Science 2021-03-05 Jiawei Wang , Li Li , Andreas Zeller

With the goal of identifying common practices in data science projects, this paper proposes a framework for logging and understanding incremental code executions in Jupyter notebooks. This framework aims to allow reasoning about how…

Human-Computer Interaction · Computer Science 2024-05-29 Jinjin Zhao , Avidgor Gal , Sanjay Krishnan

Computational notebooks, while essential for data science, are limited by their one-dimensional interface, which poorly aligns with non-linear developer workflows and complicates collaboration and human-AI interaction. In this work, we…

Software Engineering · Computer Science 2025-03-24 Konstantin Grotov , Dmitry Botov

Saving, or checkpointing, intermediate results during interactive data exploration can potentially boost user productivity. However, existing studies on this topic are limited, as they primarily rely on small-scale experiments with human…

Human-Computer Interaction · Computer Science 2025-04-03 Hanxi Fang , Supawit Chockchowwat , Hari Sundaram , Yongjoo Park

Expert systems are effective tools for automatically identifying energy efficiency potentials in manufacturing, thereby contributing significantly to global climate targets. These systems analyze energy data, pinpoint inefficiencies, and…

Artificial Intelligence · Computer Science 2024-11-05 Borys Ioshchikhes , Michael Frank , Tresa Maria Joseph , Matthias Weigold

Computational reproducibility is fundamental to trustworthy science, yet remains difficult to achieve in practice across various research workflows, including Jupyter notebooks published alongside scholarly articles. Environment drift,…

Software Engineering · Computer Science 2026-04-02 Sheeba Samuel , Daniel Mietchen , Hemanta Lo , Martin Gaedke

The database community has developed numerous tools and techniques for data curation and exploration, from declarative languages, to specialized techniques for data repair, and more. Yet, there is currently no consensus on how to best…

Databases · Computer Science 2016-06-02 Juliana Freire , Boris Glavic , Oliver Kennedy , Heiko Mueller

Computational notebooks are widely used for data analysis. Their interleaved displays of code and execution results (e.g., visualizations) are welcomed since they enable iterative analysis and preserve the exploration process. However, the…

Human-Computer Interaction · Computer Science 2023-03-08 Haotian Li , Lu Ying , Haidong Zhang , Yingcai Wu , Huamin Qu , Yun Wang

Jupyter notebook allows data scientists to write machine learning code together with its documentation in cells. In this paper, we propose a new task of code documentation generation (CDG) for computational notebooks. In contrast to the…

Software Engineering · Computer Science 2021-09-10 Xuye Liu , Dakuo Wang , April Wang , Yufang Hou , Lingfei Wu

Computational notebooks became indispensable tools for research-related development, offering unprecedented interactivity and flexibility in the development process. However, these benefits come at the cost of reproducibility and an…

Machine Learning · Computer Science 2024-10-21 Konstantin Grotov , Artem Borzilov , Maksim Krivobok , Timofey Bryksin , Yaroslav Zharov

Computational notebooks are notoriously prone to reproducibility failures. By permitting out-of-order cell execution, notebooks accumulate hidden state and implicit dependencies that cause interactive executions to silently diverge from…

Programming Languages · Computer Science 2026-05-05 Stephen N. Freund , Emery D. Berger , Cormac Flanagan , Eunice Jun

Jupyter has become the go-to platform for developing data applications but data and security concerns, especially when dealing with healthcare, have become paramount for many institutions and applications dealing with sensitive information.…

Cryptography and Security · Computer Science 2020-06-03 Haw-minn Lu , Adrian Kwong , Jose Unpingco

By bringing together code, text, and examples, Jupyter notebooks have become one of the most popular means to produce scientific results in a productive and reproducible way. As many of the notebook authors are experts in their scientific…

Software Engineering · Computer Science 2019-06-13 Jiawei Wang , Li Li , Andreas Zeller

Computational notebook software such as Jupyter Notebook is popular for data science tasks. Numerous computational notebooks are available on the Web and reusable; however, searching for computational notebooks manually is a tedious task,…

Information Retrieval · Computer Science 2022-02-01 Misato Horiuchi , Yuya Sasaki , Chuan Xiao , Makoto Onizuka

Open science initiatives seek to make research outputs more transparent, accessible, and reusable, but ensuring that published findings can be independently reproduced remains a persistent challenge. In this paper we describe an AI-driven…

Artificial Intelligence · Computer Science 2025-12-16 Adrien Bibal , Steven N. Minton , Deborah Khider , Yolanda Gil

Notebooks provide an author-friendly environment for iterative development, modular execution, and easy sharing. Distributed workflows are increasingly being authored and executed in notebooks, yet sharing and reproducing them remains…

Software Engineering · Computer Science 2026-03-31 Talha Azaz , Raza Ahmad , Md Saiful Islam , Douglas Thain , Tanu Malik

AI-powered code assistants, such as Copilot, are quickly becoming a ubiquitous component of contemporary coding contexts. Among these environments, computational notebooks, such as Jupyter, are of particular interest as they provide rich…

Human-Computer Interaction · Computer Science 2023-01-27 Andrew M. McNutt , Chenglong Wang , Robert A. DeLine , Steven M. Drucker

The increasing adoption of Jupyter notebooks in data science and machine learning workflows has created a gap between exploratory code development and production-ready software systems. While notebooks excel at iterative development and…

Software Engineering · Computer Science 2025-11-11 Hanya Elhashemy , Youssef Lotfy , Yongjian Tang

Computational notebooks, tools that facilitate storytelling through exploration, data analysis, and information visualization, have become the widely accepted standard in the data science community. These notebooks have been widely adopted…

Human-Computer Interaction · Computer Science 2023-08-08 Venkatesh Potluri , Sudheesh Singanamalla , Nussara Tieanklin , Jennifer Mankoff

For undergraduate students of computing, learning to solve complex practical problems in a team is an essential skill for their future careers. This skill is needed in various fields, such as in cybersecurity and IT governance. Tabletop…

Computers and Society · Computer Science 2024-04-18 Valdemar Švábenský , Jan Vykopal , Martin Horák , Martin Hofbauer , Pavel Čeleda