Related papers: The zero-rate threshold for adversarial bit-deleti…
In a DNA sequence, we have the celebrated Watson-Crick complement $\overline{T}=A$, $\overline{A}=T$, $\overline{C}=G$, and $\overline{G}=C$. Given an integer $m\ge 2$, a secondary structure in a DNA sequence refers to the existence of two…
We consider integer programming problems in standard form $\max \{c^Tx : Ax = b, \, x\geq 0, \, x \in Z^n\}$ where $A \in Z^{m \times n}$, $b \in Z^m$ and $c \in Z^n$. We show that such an integer program can be solved in time $(m…
Partial rigidity is a quantitative notion of recurrence and provides a global obstruction which prevents the system from being strongly mixing. A dynamical system $(X, \mathcal{X}, \mu, T)$ is partially rigid if there is a constant $\delta…
While achieving a compression ratio of 2.0 bits/base, the new algorithm codes non-N bases in fixed length. It dramatically reduces the time of coding and decoding than previous DNA compression algorithms and some universal compression…
We show that for a fixed integer $n \neq \pm2$, the congruence $x^2 + nx \pm 1 \equiv 0 \pmod{\alpha}$ has the solution $\beta$ with $0 < \beta < \alpha$ if and only if $\alpha/\beta$ has a continued fraction expansion with sequence of…
We consider the problem of implementing distributed protocols, despite adversarial channel errors, on synchronous-messaging networks with arbitrary topology. In our first result we show that any $n$-party $T$-round protocol on an undirected…
The problem of correcting deletions has received significant attention, partly because of the prevalence of these errors in DNA data storage. In this paper, we study the problem of correcting a consecutive burst of at most $t$ deletions in…
We show that for every $\varepsilon>0$ there is an absolute constant $c(\varepsilon)>0$ such that the following is true. The union of any $n$ arithmetic progressions, each of length $n$, with pairwise distinct differences must consist of at…
There has been significant work recently on integer programs (IPs) $\min\{c^\top x \colon Ax\leq b,\,x\in \mathbb{Z}^n\}$ with a constraint marix $A$ with bounded subdeterminants. This is motivated by a well-known conjecture claiming that,…
We show the existence of variable-rate rate-distortion codes that meet the disortion constraint almost surely and are minimax, i.e., strongly, universal with respect to an unknown source distribution and a distortion measure that is…
In this paper, we consider a synchronization problem between nodes $A$ and $B$ that are connected through a two--way communication channel. {Node $A$} contains a binary file $X$ of length $n$ and {node $B$} contains a binary file $Y$ that…
We devise an analytically simple as well as invertible approximate expression, which describes the relation between the minimum distance of a binary code and the corresponding maximum attainable code-rate. For example, for a rate-(1/4),…
The effects of the odd-even constraint - as an interleaver design criterion - on the performance of rate-1/2 binary turbo codes are revisited. According to the current understanding, its adoption is favored because it makes the information…
Let $W$ be a binary-input memoryless symmetric (BMS) channel with Shannon capacity $I(W)$ and fix any $\alpha > 0$. We construct, for any sufficiently small $\delta > 0$, binary linear codes of block length $O(1/\delta^{2+\alpha})$ and rate…
Given $0<\alpha<1$, the Beatty sequence of density $\alpha$ is the sequence $B_{\alpha}=(\lfloor n/\alpha\rfloor)_{n\in\mathbb{N}}$. Beatty's theorem states that if $\alpha,\beta$ are irrational numbers with $\alpha+\beta=1$, then the…
While neural networks have achieved high accuracy on standard image classification benchmarks, their accuracy drops to nearly zero in the presence of small adversarial perturbations to test inputs. Defenses based on regularization and…
We describe the structure of a set of integers $A$ of positive density $\delta$, such that $A+A$ contains no squarefree integer. It turns out that the behaviour changes abruptly at the values $\delta_0=1/4-\frac{2}{\pi^2}=0.0473...$ and…
For every p in (0,1/2), we give an explicit construction of binary codes of rate approaching "capacity" 1-H(p) that enable reliable communication in the presence of worst-case additive errors}, caused by a channel oblivious to the codeword…
We consider the maximum coding rate achievable by uniformly-random codes for the deletion channel. We prove an upper bound that's within 0.1 of the best known lower bounds for all values of the deletion probability $d,$ and much closer for…
For variable-length coding with an almost-sure distortion constraint, Zhang et al. show that for discrete sources the redundancy is upper bounded by $\log n/n$ and lower bounded (in most cases) by $\log n/(2n)$, ignoring lower order terms.…