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We study universal compression of sequences generated by monotonic distributions. We show that for a monotonic distribution over an alphabet of size $k$, each probability parameter costs essentially $0.5 \log (n/k^3)$ bits, where $n$ is the…

Information Theory · Computer Science 2007-07-13 Gil I. Shamir

This paper extends the foundational work of Dollma \emph{et al}. on codes for ordered composite DNA sequences. We consider the general setting with an alphabet of size $q$ and a resolution parameter $k$, moving beyond the binary ($q=2$)…

Information Theory · Computer Science 2026-02-19 Zuo Ye , Yuling Li , Zhaojun Lan , Gennian Ge

We develop upper bounds on code size for an independent and identically distributed deletion and insertion channels for a given code length and target frame error probability. The bounds are obtained as a variation of a general converse…

Information Theory · Computer Science 2026-04-14 Ruslan Morozov , Tolga Mete Duman

Let $(x_n)$ be a positive real sequence decreasing to $0$ such that the series $\sum_n x_n$ is divergent and $\liminf_{n} x_{n+1}/x_n>1/2$. We show that there exists a constant $\theta \in (0,1)$ such that, for each $\ell>0$, there is a…

Classical Analysis and ODEs · Mathematics 2018-05-29 Paolo Leonetti

We show that a set $A \subset \{0,1\}^{n}$ with edge-boundary of size at most $|A| (\log_{2}(2^{n}/|A|) + \epsilon)$ can be made into a subcube by at most $(2 \epsilon/\log_{2}(1/\epsilon))|A|$ additions and deletions, provided $\epsilon$…

Combinatorics · Mathematics 2013-11-28 David Ellis

It has been consistently reported that many machine learning models are susceptible to adversarial attacks i.e., small additive adversarial perturbations applied to data points can cause misclassification. Adversarial training using…

Machine Learning · Statistics 2021-07-15 Hossein Taheri , Ramtin Pedarsani , Christos Thrampoulidis

Unconditionally secure non-relativistic bit commitment is known to be impossible in both the classical and the quantum worlds. But when committing to a string of n bits at once, how far can we stretch the quantum limits? In this paper, we…

Quantum Physics · Physics 2008-08-18 Harry Buhrman , Matthias Christandl , Patrick Hayden , Hoi-Kwong Lo , Stephanie Wehner

We consider two independent binary i.i.d. random strings $X$ and $Y$ of equal length $n$ and the optimal alignments according to a symmetric scoring functions only. We decompose the space of scoring functions into five components. Two of…

Probability · Mathematics 2017-08-02 Jun Tao Duan , Heinrich Matzinger , Ionel Popescu

We prove that there exist infinitely many coprime numbers $a$, $b$, $c$ with $a+b=c$ and $c>\operatorname{rad}(abc)\exp(6.563\sqrt{\log c}/\log\log c)$. These are the most extremal examples currently known in the $abc$ conjecture, thereby…

Number Theory · Mathematics 2024-06-05 Curtis Bright

The existence of adversarial examples points to a basic weakness of deep neural networks. One of the most effective defenses against such examples, adversarial training, entails training models with some degree of robustness, usually at the…

Machine Learning · Computer Science 2023-10-05 Matan Levi , Aryeh Kontorovich

Let $(a_n), (b_n)$ be linear recursive sequences of integers with characteristic polynomials $A(X),B(X)\in \mathbb{Z}[X]$ respectively. Assume that $A(X)$ has a dominating and simple real root $\alpha$, while $B(X)$ has a pair of conjugate…

Number Theory · Mathematics 2021-11-23 Attila Pethő

We study the duplication with transposition distance between strings of length $n$ over a $q$-ary alphabet and their roots. In other words, we investigate the number of duplication operations of the form $x = (abcd) \to y = (abcbd)$, where…

Information Theory · Computer Science 2020-01-20 Nikita Polyanskii , Ilya Vorobyev

The interest in channel models in which the data is sent as an unordered set of binary strings has increased lately, due to emerging applications in DNA storage, among others. In this paper we analyze the minimal redundancy of binary codes…

Information Theory · Computer Science 2019-10-29 Jin Sima , Netanel Raviv , Jehoshua Bruck

We consider the problem of efficient construction of q-ary 2-deletion correcting codes with low redundancy. We show that our construction requires less redundancy than any existing efficiently encodable q-ary 2-deletion correcting codes.…

Information Theory · Computer Science 2023-06-12 Shu Liu , Ivan Tjuawinata , Chaoping Xing

We consider the problem of constructing binary codes to recover from $k$-bit deletions with efficient encoding/decoding, for a fixed $k$. The single deletion case is well understood, with the Varshamov-Tenengolts-Levenshtein code from 1965…

Information Theory · Computer Science 2019-05-21 Joshua Brakensiek , Venkatesan Guruswami , Samuel Zbarsky

For arbitrary $c_0>0$, if $A$ is a subset of the primes less than $x$ with cardinality $\delta x (\log x)^{-1}$ with $\delta\geq (\log x)^{-c_0}$, then there exists a positive constant $c$ such that the cardinality of $A+A$ is larger than…

Number Theory · Mathematics 2013-03-20 Zhen Cui , Hongze Li , Boqing Xue

A longstanding open problem in coding theory is to determine the best (asymptotic) rate $R_2(\delta)$ of binary codes with minimum constant (relative) distance $\delta$. An existential lower bound was given by Gilbert and Varshamov in the…

Information Theory · Computer Science 2021-12-20 Leonardo Nagami Coregliano , Fernando Granha Jeronimo , Chris Jones

Let $s$ be a string of length $n$ over an alphabet of constant size $\sigma$ and let $c$ and $\epsilon$ be constants with (1 \geq c \geq 0) and (\epsilon > 0). Using (O (n)) time, (O (n^c)) bits of memory and one pass we can always encode…

Information Theory · Computer Science 2007-08-15 Travis Gagie

Locally decodable channel codes form a special class of error-correcting codes with the property that the decoder is able to reconstruct any bit of the input message from querying only a few bits of a noisy codeword. It is well known that…

Information Theory · Computer Science 2013-08-28 Ali Makhdoumi , Shao-Lun Huang , Muriel Medard , Yury Polyanskiy

We consider the problem of coding for the substring channel, in which information strings are observed only through their (multisets of) substrings. Due to existing DNA sequencing techniques and applications in DNA-based storage systems,…

Information Theory · Computer Science 2024-03-27 Yonatan Yehezkeally , Nikita Polyanskii
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