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Related papers: Modelling on the very large-scale connectome

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The hypothesis, that cortical dynamics operates near criticality also suggests, that it exhibits universal critical exponents which marks the Kuramoto equation, a fundamental model for synchronization, as a prime candidate for an underlying…

Disordered Systems and Neural Networks · Physics 2019-12-24 Géza Ódor , Jeffrey Kelling

Previous simulation studies on human connectomes suggested, that critical dynamics emerge subcrititcally in the so called Griffiths Phases. %This is the consequence of the strong heterogeneity of the graphs. Now we investigate this on the…

Neurons and Cognition · Quantitative Biology 2022-04-22 Géza Ódor , Gustavo Deco , Jeffrey Kelling

We have extended the study of the Kuramoto model with additive Gaussian noise running on the KKI-18 large human connectome graph. We determined the dynamical behavior of this model by solving it numerically in an assumed homeostatic state,…

Adaptation and Self-Organizing Systems · Physics 2021-09-28 Géza Ódor , Jeffrey Kelling , Gustavo Deco

Evidence of critical dynamics has been recently found in both experiments and models of large scale brain dynamics. The understanding of the nature and features of such critical regime is hampered by the relatively small size of the…

Disordered Systems and Neural Networks · Physics 2019-12-04 Mahdi Zarepour , Juan I. Perotti , Orlando V. Billoni , Dante R. Chialvo , Sergio A. Cannas

Criticality can be exactly demonstrated in certain models of brain activity, yet it remains challenging to identify in empirical data. We trained a fully connected deep neural network to learn the phases of an excitable model unfolding on…

Neurons and Cognition · Quantitative Biology 2022-06-13 Hernan Bocaccio , Enzo Tagliazucchi

The spontaneous emergence of coherent behavior through synchronization plays a key role in neural function, and its anomalies often lie at the basis of pathologies. Here we employ a parsimonious (mesoscopic) approach to study analytically…

Neurons and Cognition · Quantitative Biology 2014-09-30 Pablo Villegas , Paolo Moretti , Miguel A. Muñoz

The Kuramoto model for an ensemble of coupled oscillators provides a paradigmatic example of non-equilibrium transitions between an incoherent and a synchronized state. Here we analyze populations of almost identical oscillators in…

Disordered Systems and Neural Networks · Physics 2013-05-30 Luce Prignano , Albert Diaz Guilera

Extended numerical simulations of threshold models have been performed on a human brain network with N=836733 connected nodes available from the Open Connectome project. While in case of simple threshold models a sharp discontinuous phase…

Disordered Systems and Neural Networks · Physics 2016-12-28 Géza Ódor

Partial, frustrated synchronization and chimera-like states are expected to occur in Kuramoto-like models if the spectral dimension of the underlying graph is low: $d_s < 4$. We provide numerical evidence that this really happens in case of…

Statistical Mechanics · Physics 2024-03-27 Shengfeng Deng , Géza Ódor

We consider the Kuramoto model on sparse random networks such as the Erd\H{o}s-R\'enyi graph or its combination with a regular two-dimensional lattice and study the dynamical scaling behavior of the model at the synchronization transition…

Statistical Mechanics · Physics 2019-09-04 R. Juhász , J. Kelling , G. Ódor

The characterisation of the brain as a "connectome", in which the connections are represented by correlational values across timeseries and as summary measures derived from graph theory analyses, has been very popular in the last years.…

Machine Learning · Computer Science 2020-03-13 Tiago Azevedo , Luca Passamonti , Pietro Liò , Nicola Toschi

I provide numerical evidence for the robustness of the Griffiths phase (GP) reported previously in dynamical threshold model simulations on a large human brain network with N=836733 connected nodes. The model, with equalized network…

Disordered Systems and Neural Networks · Physics 2019-03-27 Géza Ódor

A major challenge in neuroscience is posed by the need for relating the emerging dynamical features of brain activity with the underlying modular structure of neural connections, hierarchically organized throughout several scales. The…

Neurons and Cognition · Quantitative Biology 2016-06-03 Pablo Villegas , Jorge Hidalgo , Paolo Moretti , Miguel A. Muñoz

We investigate the synchronization transition of the Shinomoto-Kuramoto model on networks of the fruit-fly and two large human connectomes. This model contains a force term, thus is capable of describing critical behavior in the presence of…

Disordered Systems and Neural Networks · Physics 2023-03-10 Géza Ódor , István Papp , Shengfeng Deng , Jeffrey Kelling

Is the brain really operating at a critical point? We study the non-equilibrium properties of a neural network which models the dynamics of the neocortex and argue for optimal quasi-critical dynamics on the Widom line where the correlation…

Neurons and Cognition · Quantitative Biology 2015-06-19 Rashid V. Williams-Garcia , Mark Moore , John M. Beggs , Gerardo Ortiz

A paradigmatic framework to study the phenomenon of spontaneous collective synchronization is provided by the Kuramoto model comprising a large collection of limit-cycle oscillators of distributed frequencies that are globally coupled…

Adaptation and Self-Organizing Systems · Physics 2020-09-08 Mrinal Sarkar , Shamik Gupta

The relation between large-scale brain structure and function is an outstanding open problem in neuroscience. We approach this problem by studying the dynamical regime under which realistic spatio-temporal patterns of brain activity emerge…

Neurons and Cognition · Quantitative Biology 2014-05-27 Ariel Haimovici , Enzo Tagliazucchi , Pablo Balenzuela , Dante R. Chialvo

In the context of the celebrated Kuramoto model of globally-coupled phase oscillators of distributed natural frequencies, which serves as a paradigm to investigate spontaneous collective synchronization in many-body interacting systems, we…

Adaptation and Self-Organizing Systems · Physics 2017-09-20 Shamik Gupta

One of the simplest mathematical models in the study of nonlinear systems is the Kuramoto model, which describes synchronization in systems from swarms of insects to superconductors. We have recently found a connection between the original,…

Spontaneous synchronization is a remarkable collective effect observed in nature, whereby a population of oscillating units, which have diverse natural frequencies and are in weak interaction with one another, evolves to spontaneously…

Adaptation and Self-Organizing Systems · Physics 2018-08-23 Stefano Gherardini , Shamik Gupta , Stefano Ruffo
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