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Related papers: Modelling on the very large-scale connectome

200 papers

Brain imaging data mapping onto human connectome networks enables the investigation of global brain dynamics, where the brain hubs play an essential role in transferring activity between different brain parts. At this scale, the…

Pattern Formation and Solitons · Physics 2025-07-11 Bosiljka Tadic , Marija Mitrovic Dankulov , Roderick Melnik

We consider the theoretical constraints on interactions between coupled cortical columns. Each column comprises a set of neural populations, where each population is modelled as a neural mass. The existence of semi-stable states within a…

Neurons and Cognition · Quantitative Biology 2023-01-04 Gerald K. Cooray , Richard E. Rosch , Karl J. Friston

Understanding how neural dynamics shape cognitive experiences remains a central challenge in neuroscience and psychiatry. Here, we present a novel framework leveraging state-to-output controllability from dynamical systems theory to model…

We present an interacting branching model of neural network dynamics, incorporating key biological features such as inhibition with several types of inhibitory interactions. We establish a hierarchy of analytical mean-field approximations…

Disordered Systems and Neural Networks · Physics 2025-12-29 Jeremy B. Goetz , Naruepon Weerawongphrom , Rashid V. Williams-García , John M. Beggs , Gerardo Ortiz

Many of the amazing functional capabilities of the brain are collective properties stemming from the interactions of large sets of individual neurons. In particular, the most salient collective phenomena in brain activity are oscillations,…

Neurons and Cognition · Quantitative Biology 2022-06-29 Victor Buendía , Pablo Villegas , Raffaella Burioni , Miguel A. Muñoz

A prominent hypothesis in neuroscience proposes that brains achieve optimal performance by operating near a critical point. However, this framework, which often assumes a universal critical point, fails to account for the extensive…

Neurons and Cognition · Quantitative Biology 2025-12-04 Kejian Wu , Dante R. Chialvo , Changsong Zhou , Lianchun Yu

Synchronization of brain activity fluctuations is believed to represent communication between spatially distant neural processes. These inter-areal functional interactions develop in the background of a complex network of axonal connections…

Neurons and Cognition · Quantitative Biology 2016-11-10 Ariel Haimovici , Pablo Balenzuela , Enzo Tagliazucchi

We investigate the distance from equilibrium using the Kuramoto model via the degree of fluctuation-dissipation violation as the consequence of different levels of edge weight anisotropies. This is achieved by solving the synchronization…

Disordered Systems and Neural Networks · Physics 2025-03-27 Géza Ódor , István Papp , Gustavo Deco

The connectome, a map of the structural and/or functional connections in the brain, provides a complex representation of the neurobiological phenotypes on which it supervenes. This information-rich data modality has the potential to…

Synchronization is a universal phenomenon found in many non-equilibrium systems. Much recent interest in this area has overlapped with the study of complex networks, where a major focus is determining how a system's connectivity patterns…

Adaptation and Self-Organizing Systems · Physics 2015-08-19 Jason Hindes , Christopher R. Myers

Synchronization of an ensemble of oscillators is an emergent phenomenon present in several complex systems, ranging from social and physical to biological and technological systems. The most successful approach to describe how coherent…

Adaptation and Self-Organizing Systems · Physics 2016-01-19 Francisco A. Rodrigues , Thomas K. DM. Peron , Peng Ji , Jürgen Kurths

The continuous integration of experimental data into coherent models of the brain is an increasing challenge of modern neuroscience. Such models provide a bridge between structure and activity, and identify the mechanisms giving rise to…

Neurons and Cognition · Quantitative Biology 2017-03-03 Jannis Schuecker , Maximilian Schmidt , Sacha J. van Albada , Markus Diesmann , Moritz Helias

Coordination is ubiquitous in living systems. Existing theoretical models of coordination -- from bacteria to brains -- focus on either gross statistics in large-scale systems ($N\rightarrow\infty$) or detailed dynamics in small-scale…

Biological Physics · Physics 2019-08-16 Mengsen Zhang , Christopher Beetle , J. A. Scott Kelso , Emmanuelle Tognoli

Large-scale white matter pathways crisscrossing the cortex create a complex pattern of connectivity that underlies human cognitive function. Generative mechanisms for this architecture have been difficult to identify in part because little…

Neurons and Cognition · Quantitative Biology 2015-06-16 Florian Klimm , Danielle S. Bassett , Jean M. Carlson , Peter J. Mucha

Complex spatiotemporal patterns, called chimera states, consist of coexisting coherent and incoherent domains and can be observed in networks of coupled oscillators. The interplay of synchrony and asynchrony in complex brain networks is an…

Adaptation and Self-Organizing Systems · Physics 2019-06-20 Teresa Chouzouris , Iryna Omelchenko , Anna Zakharova , Jaroslav Hlinka , Premysl Jiruska , Eckehard Schöll

Bursting neurons fire rapid sequences of action potential spikes followed by a quiescent period. The basic dynamical mechanism of bursting is the slow currents that modulate a fast spiking activity caused by rapid ionic currents. Minimal…

Chaotic Dynamics · Physics 2015-02-16 Fabiano A. S. Ferrari , Ricardo L. Viana , Sérgio R. Lopes , Ruedi Stoop

The Kuramoto model, a paradigmatic framework for studying synchronization, exhibits a transition to collective oscillations only above a critical coupling strength in the thermodynamic limit. However, real-world systems are finite, and…

Chaotic Dynamics · Physics 2025-06-30 Sergei Kirillov , Vladimir Klinshov

Recently, there has been considerable interest in the study of spontaneous synchronization, particularly within the framework of the Kuramoto model. The model comprises oscillators with distributed natural frequencies interacting through a…

Statistical Mechanics · Physics 2014-08-29 Shamik Gupta , Alessandro Campa , Stefano Ruffo

Experimental fMRI studies have shown that spontaneous brain activity i.e. in the absence of any external input, exhibit complex spatial and temporal patterns of co-activity between segregated brain regions. These so-called large-scale…

Adaptation and Self-Organizing Systems · Physics 2015-06-23 Vesna Vuksanović , Philipp Hövel

Balanced neural networks -- in which excitatory and inhibitory inputs compensate each other on average -- give rise to a dynamical phase dominated by fluctuations called asynchronous state, crucial for brain functioning. However, structural…

Statistical Mechanics · Physics 2024-03-05 Jorge Pretel , Victor Buendía , Joaquín J. Torres , Miguel A. Muñoz