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Observations of single epidermal cells on flat adhesive substrates have revealed two distinct morphological and functional states, namely a non-migrating symmetric unpolarized state and a migrating asymmetric polarized state. These states…

Biological Physics · Physics 2010-04-14 Wolfgang Alt , Martin Bock , Christoph Möhl

Cancer cells exhibit increased motility and proliferation, which are instrumental in the formation of tumours and metastases. These pathological changes can be traced back to malfunctions of cellular signalling pathways, and calcium…

Cell Behavior · Quantitative Biology 2020-03-03 Katerina Kaouri , Vasiliki Bitsouni , Andreas Buttenschön , Rüdiger Thul

Zinc-fingers, which widely exist in eukaryotic cell and play crucial roles in life processes, depend on the binding of zinc ion for their proper folding. To computationally study the zinc coupled folding of the zinc-fingers, charge transfer…

Biological Physics · Physics 2008-06-17 Wenfei Li , Jian Zhang , Jun Wang , Wei Wang

Defects in crystalline silicon consisting of a silicon self-interstitial atom and one, two, three, or four hydrogen atoms are studied within density-functional theory (DFT). We search for low-energy defects by starting from an ensemble of…

Materials Science · Physics 2010-02-11 Andrew J. Morris , Chris J. Pickard , R. J. Needs

Theoretical investigations of the hyperfine structure of the hydrogen molecular ion (one electron and two protons) are discussed. The nuclear spin-rotation interaction has been found to be of the same sign as in the hydrogen molecule and…

Atomic Physics · Physics 2008-02-03 J. F. Babb

The migration behaviors of cancer cells are known to be heterogeneous. However, the interplay between the adhesion interactions, dynamical shape changes and fluid flows in regulating cell migration heterogeneity and plasticity during cancer…

Soft Condensed Matter · Physics 2020-01-22 Himadri S Samanta

MXenes are a new, and growing, family of 2D materials with very promising properties for a wide variety of applications. Obtained from the etching of MAX phases, numerous properties can be targeted thanks to the chemical richness of the…

Molecular hydrogen ions are of metrological relevance due to the possibility of precise theoretical evaluation of their spectrum and of external-field-induced shifts. In homonuclear molecular ions the electric dipole $E1$ transitions are…

Atomic Physics · Physics 2021-01-20 P. Danev , D. Bakalov , V. I. Korobov , S. Schiller

Histone deacetylase (HDAC) and Histone acetyl-transferase (HAT) are enzymes that influence transcription by selectively deacetylating or acetylating the (epsilon)-amino groups of lysine located near the amino termini of core histone…

Biomolecules · Quantitative Biology 2012-09-14 Maria Antony Dhivyan JE , Anoop MN

Hill function is one of the widely used gene transcription regulation models. Its attribute of fitting may result in a lack of an underlying physical picture, yet the fitting parameters can provide information about biochemical reactions,…

Molecular Networks · Quantitative Biology 2024-03-05 Wenjia Shi , Yao Ma , Peilin Hu , Mi Pang , Xiaona Huang , Yiting Dang , Yuxin Xie , Danni Wu

Cell mechanical properties are fundamental to the organism but remain poorly understood. We report a comprehensive phenomenological framework for the nonlinear rheology of single fibroblast cells: a superposition of elastic stiffening and…

Biological Physics · Physics 2009-11-13 Pablo Fernández , Albrecht Ott

Biopolymer Networks play an important role in coordinating and regulating collective cellular dynamics via a number of signaling pathways. Here, we investigate the mechanical response of a model biopolymer network due to the active…

Soft Condensed Matter · Physics 2016-11-23 Long Liang , Christopher Jones , Bo Sun , Yang Jiao

The fitness of somatic cells of metazoan, the ability of proliferation and survival, depends on microenvironment. In somatic evolution, a mutated cell in a tissue clonally expands abnormally because of its high fitness as normal cells in a…

Populations and Evolution · Quantitative Biology 2015-09-07 Xiang-Ping Jia , Hong Sun

Single molecule force spectroscopy provide details of the underlying energy surfaces of proteins which are essential to the understanding of their unfolding process. Recently, it has been observed experimentally that by pulling proteins in…

Statistical Mechanics · Physics 2009-11-13 R. Rajesh , D. Giri , I. Jensen , S. Kumar

Anthracene derivative compounds are currently investigated because of their unique physical properties (e.g., bright luminescence and emission tunability), which make them ideal candidates for advanced optoelectronic devices. Intermolecular…

The concept of local symmetry dynamics has recently been used to demonstrate the evolution of discrete symmetries in one-dimensional chains leading to emergent periodicity. Here we go one step further and show that the unboundedness of this…

Quantum Physics · Physics 2023-07-13 Peter Schmelcher

The EMC effect in deuterium and helium-3 is studied using a convolution formalism that allows isolating the impact of high-momentum nucleons in short-ranged correlated (SRC) pairs. We assume that the modification of the structure function…

High Energy Physics - Phenomenology · Physics 2021-06-30 E. P. Segarra , J. R. Pybus , F. Hauenstein , D. W. Higinbotham , G. A. Miller , E. Piasetzky , A. Schmidt , M. Strikman , L. B. Weinstein , O. Hen

Improving the detailed understanding of the underlying properties and functions of biomolecules has recently attracted growing interest, enabled by the possibility of real-space imaging of single, intact macromolecules using Scanning…

Mesoscale and Nanoscale Physics · Physics 2026-03-10 Tim J. Seifert , Dhaneesh Kumar , Markus Etzkorn , Stephan Rauschenbach , Klaus Kern , Kelvin Anggara , Uta Schlickum

The efficacy of drug treatments depends on how tightly small molecules bind to their target proteins. The rapid and accurate quantification of the strength of these interactions (as measured by binding affinity) is a grand challenge of…

Distributed, Parallel, and Cluster Computing · Computer Science 2018-10-30 Jumana Dakka , Kristof Farkas-Pall , Matteo Turilli , David W Wright , Peter V Coveney , Shantenu Jha

Squeezed correlations of particle-antiparticle pairs, also called Back-to-Back Correlations, are predicted to appear if the hadron masses are modified in the hot and dense hadronic medium formed in high energy nucleus-nucleus collisions.…

Nuclear Theory · Physics 2008-11-26 Sandra S. Padula , O. Socolowski , T. Csorgo , M. I. Nagy