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Cryo-electron microscopy (cryo-EM) has recently emerged as a powerful tool for obtaining three-dimensional (3D) structures of biological macromolecules in native states. A minimum cryo-EM image data set for deriving a meaningful…

Applications · Statistics 2014-04-28 Ting-Li Chen , Dai-Ni Hsieh , Hung Hung , I-Ping Tu , Pei-Shien Wu , Yi-Ming Wu , Wei-Hau Chang , Su-Yun Huang

Robust and accurate camera calibration is essential for 3D reconstruction in light microscopy under circular motion. Conventional methods require either accurate key point matching or precise segmentation of the axial-view images. Both…

Computer Vision and Pattern Recognition · Computer Science 2019-10-31 Yuanhao Guo , Fons J. Verbeek , Ge Yang

3D image reconstruction from a set of X-ray projections is an important image reconstruction problem, with applications in medical imaging, industrial inspection and airport security. The innovation of X-ray emitter arrays allows for a…

Medical Physics · Physics 2016-11-23 Maria Klodt , Raphael Hauser

The quantitative spectroscopy of stellar objects in complex environments is mainly limited by the ability of separating the object from the background. Standard slit spectroscopy, restricting the field of view to one dimension, is obviously…

Astrophysics · Physics 2009-11-10 Thomas Becker , Sergei Fabrika , Martin M. Roth

We present a novel algorithm to compute multi-scale curvature fields on triangle meshes. Our algorithm is based on finding robust mean curvatures using the ball neighborhood, where the radius of a ball corresponds to the scale of the…

Graphics · Computer Science 2016-11-01 Patrick Seemann , Simon Fuhrmann , Stefan Guthe , Fabian Langguth , Michael Goesele

Three-dimensional atomic resolution imaging using transmission electron microscopes is a unique capability that requires challenging experiments. Linear electron tomography methods are limited by the missing wedge effect, requiring a high…

Computational Physics · Physics 2024-07-30 Shengboy You , Andrey Romanov , Philipp Pelz

A common task in cryo-electron microscopy (cryo-EM) data processing is to compare three-dimensional density maps of macromolecules. In this paper, we propose an algorithm for aligning three-dimensional density maps that exploits common…

Image and Video Processing · Electrical Eng. & Systems 2023-02-27 Yael Harpaz , Yoel Shkolnisky

A quantum edge detector for image segmentation in optical environments is presented in this work. A Boolean version of the same detector is presented too. The quantum version of the new edge detector works with computational basis states,…

Computer Vision and Pattern Recognition · Computer Science 2014-09-11 Mario Mastriani

Cryo-electron microscopy (EM) single particle reconstruction is an entirely general technique for 3D structure determination of macromolecular complexes. However, because the images are taken at low electron dose, it is extremely hard to…

Computer Vision and Pattern Recognition · Computer Science 2019-04-17 Yifeng Fan , Zhizhen Zhao

There is a clear need for developments in characterisation techniques that provide detailed information about structure-function relationships in biology. Using electron microscopy to achieve high resolution while maintaining a broad field…

Quantitative Methods · Quantitative Biology 2023-09-12 Chen Huang , Judy S. Kim , Angus I. Kirkland

In the process of projecting the surface of a three-dimensional object onto a two-dimensional surface, due to the perspective distortion, the image on the surface of the object will have different degrees of distortion according to the…

Image and Video Processing · Electrical Eng. & Systems 2022-12-29 Yuhan Xu , Renqing Luo

3D shape reconstruction typically requires identifying object features or textures in multiple images of a subject. This approach is not viable when the subject is semi-transparent and moving in and out of focus. Here we overcome these…

Computer Vision and Pattern Recognition · Computer Science 2023-05-01 Thomas P. Ilett , Omer Yuval , Thomas Ranner , Netta Cohen , David C. Hogg

Recovering the 3D structure of an object from a single image is a challenging task due to its ill-posed nature. One approach is to utilize the plentiful photos of the same object category to learn a strong 3D shape prior for the object.…

Computer Vision and Pattern Recognition · Computer Science 2021-09-08 Long-Nhat Ho , Anh Tuan Tran , Quynh Phung , Minh Hoai

We introduce a new problem of retrieving 3D models that are deformable to a given query shape and present a novel deep deformation-aware embedding to solve this retrieval task. 3D model retrieval is a fundamental operation for recovering a…

Computer Vision and Pattern Recognition · Computer Science 2020-08-03 Mikaela Angelina Uy , Jingwei Huang , Minhyuk Sung , Tolga Birdal , Leonidas Guibas

Wavelets are closely related to the Schr\"odinger's wave functions and the interpretation of Born. Similarly to the appearance of atomic orbital, it is proposed to combine anti-symmetric wavelets into orbital wavelets. The proposed approach…

Signal Processing · Electrical Eng. & Systems 2020-10-02 H. M. de Oliveira , V. V. Vermehren , R. J. Cintra

The two-dimensional (2D) orientation field transform has been proved to be effective at enhancing 2D contours and curves in images by means of top-down processing. It, however, has no counterpart in three-dimensional (3D) images due to the…

Computer Vision and Pattern Recognition · Computer Science 2020-10-06 Wai-Tsun Yeung , Xiaohao Cai , Zizhen Liang , Byung-Ho Kang

A simple method of constructing the 3D surface of non-transparent micro-objects by extending the depth-of-field on the whole attainable surface is presented. The series of images of a sample are recorded by the sequential movement of the…

Instrumentation and Detectors · Physics 2009-04-15 V. V. Berejnov

Three-dimensional (3D) imaging techniques appeal to a broad range of scientific and industrial applications. Typically, projection slice theorem enables multiple two-dimensional (2D) projections of an object to be combined in the Fourier…

Optics · Physics 2013-11-19 Leigh S. Martin , Chien-Chun Chen , Jianwei Miao

This paper is concerned with investigating super-resolution algorithms and solutions for handling electron microscopic images. We note two main aspects differentiating the problem discussed here from those considered in the literature. The…

Image and Video Processing · Electrical Eng. & Systems 2020-08-26 Yanjun Qian , Jiaxi Xu , Lawrence F. Drummy , Yu Ding

The paper addresses the generalization of the half-quadratic minimization method for the restoration of images having values in a complete Riemannian manifold. We recall the half-quadratic minimization method using the notation of the…

Numerical Analysis · Mathematics 2018-12-10 Ronny Bergmann , Raymond H. Chan , Ralf Hielscher , Johannes Persch , Gabriele Steidl
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