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Message-passing neural networks (MPNNs) are the leading architecture for deep learning on graph-structured data, in large part due to their simplicity and scalability. Unfortunately, it was shown that these architectures are limited in…

Transformer architectures, capable of capturing sequential dependencies in the history of user interactions, have become the dominant approach in sequential recommender systems. Despite their success, such models consider sequence elements…

Information Retrieval · Computer Science 2026-03-02 Artur Gimranov , Viacheslav Yusupov , Elfat Sabitov , Tatyana Matveeva , Anton Lysenko , Ruslan Israfilov , Evgeny Frolov

Temporal graph is an abstraction for modeling dynamic systems that consist of evolving interaction elements. In this paper, we aim to solve an important yet neglected problem -- how to learn information from high-order neighbors in temporal…

Machine Learning · Computer Science 2023-04-17 Zehong Wang , Qi Li , Donghua Yu

Transformer architecture has shown impressive performance in multiple research domains and has become the backbone of many neural network models. However, there is limited understanding on how it works. In particular, with a simple…

Computation and Language · Computer Science 2023-10-31 Yuandong Tian , Yiping Wang , Beidi Chen , Simon Du

Graph neural networks have triggered a resurgence of graph-based text classification methods, defining today's state of the art. We show that a wide multi-layer perceptron (MLP) using a Bag-of-Words (BoW) outperforms the recent graph-based…

Computation and Language · Computer Science 2022-04-13 Lukas Galke , Ansgar Scherp

Many real-world graphs (networks) are heterogeneous with different types of nodes and edges. Heterogeneous graph embedding, aiming at learning the low-dimensional node representations of a heterogeneous graph, is vital for various…

Social and Information Networks · Computer Science 2021-12-15 Wentao Xu , Yingce Xia , Weiqing Liu , Jiang Bian , Jian Yin , Tie-Yan Liu

The Transformer architecture, underpinned by the self-attention mechanism, has become the de facto standard for sequence modeling tasks. However, its core computational primitive scales quadratically with sequence length (O(N^2)), creating…

Computation and Language · Computer Science 2025-09-03 Rishiraj Acharya

By incorporating the graph structural information into Transformers, graph Transformers have exhibited promising performance for graph representation learning in recent years. Existing graph Transformers leverage specific strategies, such…

Machine Learning · Computer Science 2022-11-16 Gaichao Li , Jinsong Chen , Kun He

Spatiotemporal data faces many analogous challenges to natural language text including the ordering of locations (words) in a sequence, long range dependencies between locations, and locations having multiple meanings. In this work, we…

Machine Learning · Computer Science 2024-10-15 Athanasios Tsiligkaridis , Nicholas Kalinowski , Zhongheng Li , Elizabeth Hou

The rise of Multi-modal Pre-training highlights the necessity for a unified Multi-Modal Knowledge Graph (MMKG) representation learning framework. Such a framework is essential for embedding structured knowledge into multi-modal Large…

Computation and Language · Computer Science 2025-01-16 Zhuo Chen , Yin Fang , Yichi Zhang , Lingbing Guo , Jiaoyan Chen , Jeff Z. Pan , Huajun Chen , Wen Zhang

Multi-hop reading comprehension focuses on one type of factoid question, where a system needs to properly integrate multiple pieces of evidence to correctly answer a question. Previous work approximates global evidence with local…

Computation and Language · Computer Science 2018-09-07 Linfeng Song , Zhiguo Wang , Mo Yu , Yue Zhang , Radu Florian , Daniel Gildea

The Abstract Meaning Representation (AMR) is a representation for open-domain rich semantics, with potential use in fields like event extraction and machine translation. Node generation, typically done using a simple dictionary lookup, is…

Computation and Language · Computer Science 2015-06-11 Keenon Werling , Gabor Angeli , Christopher Manning

How to obtain informative representations of molecules is a crucial prerequisite in AI-driven drug design and discovery. Recent researches abstract molecules as graphs and employ Graph Neural Networks (GNNs) for molecular representation…

Biomolecules · Quantitative Biology 2020-10-30 Yu Rong , Yatao Bian , Tingyang Xu , Weiyang Xie , Ying Wei , Wenbing Huang , Junzhou Huang

We present a novel approach to tackle explainability of deep graph networks in the context of molecule property prediction tasks, named MEG (Molecular Explanation Generator). We generate informative counterfactual explanations for a…

Quantitative Methods · Quantitative Biology 2020-11-11 Danilo Numeroso , Davide Bacciu

Graph representation learning has made major strides over the past decade. However, in many relational domains, the input data are not suited for simple graph representations as the relationships between entities go beyond pairwise…

Machine Learning · Computer Science 2021-01-20 Balasubramaniam Srinivasan , Da Zheng , George Karypis

Self-supervised auto-encoders have emerged as a successful framework for representation learning in computer vision and natural language processing in recent years, However, their application to graph data has been met with limited…

Artificial Intelligence · Computer Science 2023-01-31 Chengyu Sun

We present graph attention networks (GATs), novel neural network architectures that operate on graph-structured data, leveraging masked self-attentional layers to address the shortcomings of prior methods based on graph convolutions or…

Machine Learning · Statistics 2018-02-06 Petar Veličković , Guillem Cucurull , Arantxa Casanova , Adriana Romero , Pietro Liò , Yoshua Bengio

Abstractive text summarization is a challenging task, and one need to design a mechanism to effectively extract salient information from the source text and then generate a summary. A parsing process of the source text contains critical…

Computation and Language · Computer Science 2020-03-19 Haiyang Xu , Yun Wang , Kun Han , Baochang Ma , Junwen Chen , Xiangang Li

Generating longer textual sequences when conditioned on the visual information is an interesting problem to explore. The challenge here proliferate over the standard vision conditioned sentence-level generation (e.g., image or video…

Computer Vision and Pattern Recognition · Computer Science 2020-07-14 Aditya Mogadala , Marius Mosbach , Dietrich Klakow

The self-attention mechanism in transformers and the message-passing mechanism in graph neural networks are repeatedly applied within deep learning architectures. We show that this application inevitably leads to oversmoothing, i.e., to…

Machine Learning · Computer Science 2023-06-05 Ameen Ali , Tomer Galanti , Lior Wolf