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Regular vegetation patterns in semiarid ecosystems are believed to arise from the interplay between long-range competition and facilitation processes acting at smaller distances. We show that, under rather general conditions, long-range…

Populations and Evolution · Quantitative Biology 2014-07-24 Ricardo Martinez-Garcia , Justin M. Calabrese , Emilio Hernandez-Garcia , Cristobal Lopez

Dormancy is an essential strategy for microorganisms to cope with environmental stress. However, global ecosystem models typically ignore microbial dormancy, resulting in major model uncertainties. To facilitate the consideration of…

Quantitative Methods · Quantitative Biology 2014-02-20 Gangsheng Wang , Melanie A. Mayes , Lianhong Gu , Christopher W. Schadt

In this study three soil ecosystems, that differ in the type of management, have been compared in the attempt to understand if and how anthropogenic action affects them. The structure of the corresponding food webs was analyzed and their…

Populations and Evolution · Quantitative Biology 2020-05-28 Letizia Stella Di Mauro , Christian Mulder , Erminia Conti , Alessandro Pluchino

Dormancy is a widespread adaptive strategy that enables populations to persist in fluctuating environments, yet how its benefits depend on the temporal structure of environmental variability remains unclear. We examine how dormancy…

Populations and Evolution · Quantitative Biology 2025-12-08 Jorge Hidalgo , Lorenzo Fant , Rafael Rubio de Casas , Miguel A. Muñoz

Seagrass meadows are among the most important coastal ecosystems, in terms of both spatial extent and ecosystem services, but they are also declining worldwide. Understanding the drivers of seagrass meadow dynamics is essential for…

Populations and Evolution · Quantitative Biology 2019-11-07 Sophie Arnaud-Haond , Solenn Stoeckel , Diane Bailleul

In microbial communities, each species often has multiple, distinct phenotypes, but studies of ecological stability have largely ignored this subpopulation structure. Here, we show that such implicit averaging over phenotypes leads to…

Populations and Evolution · Quantitative Biology 2020-05-20 Pierre A. Haas , Nuno M. Oliveira , Raymond E. Goldstein

Habitat loss is one of the biggest threats facing plant species nowadays. We formulate a simple mathematical model of seed dispersal on reduced habitats to discuss survival of the species in relation to the habitat size and seeds production…

Probability · Mathematics 2023-05-24 Cristian F. Coletti , Nevena Marić , Pablo M. Rodriguez

We present new theoretical and empirical results on the probability distributions of species persistence times in natural ecosystems. Persistence times, defined as the timespans occurring between species' colonization and local extinction…

Populations and Evolution · Quantitative Biology 2012-03-21 S. Suweis , E. Bertuzzo , L. Mari , I. Rodriguez-Iturbe , A. Maritan , A. Rinaldo

The preservation of soil health is a critical challenge in the 21st century due to its significant impact on agriculture, human health, and biodiversity. We provide the first deep investigation of the predictive potential of machine…

Machine Learning · Statistics 2024-02-20 Rosa Aghdam , Xudong Tang , Shan Shan , Richard Lankau , Claudia Solís-Lemus

Seagrasses are key structural elements in coastal ecosystems, and studying how temperature affects these species is crucial to anticipate the implications of global warming. In this work, we use an empirically-based numerical model to study…

Populations and Evolution · Quantitative Biology 2023-05-12 Eva Llabrés , Aina Blanco-Magadán , Marta Sales , Tomàs Sintes

In this paper, we focus on the problem of stable prediction across unknown test data, where the test distribution is agnostic and might be totally different from the training one. In such a case, previous machine learning methods might…

Machine Learning · Computer Science 2020-06-11 Kun Kuang , Bo Li , Peng Cui , Yue Liu , Jianrong Tao , Yueting Zhuang , Fei Wu

Honeybees play an important role in the production of many agricultural crops and in sustaining plant diversity in undisturbed ecosystems. The rapid decline of honeybee populations have sparked great concern worldwide. Previous studies have…

Populations and Evolution · Quantitative Biology 2020-08-12 Komi Messan , Marisabel Rodriguez Messan , Jun Chen , Gloria DeGrandi-Hoffman , Yun Kang

This paper studied the relationship between the decomposition rate of fungi and temperature, humidity, fungus elongation, moisture tolerance and fungus density in a given volume in the presence of a variety of fungi, and established a…

Populations and Evolution · Quantitative Biology 2022-08-05 Tongyue Shi , Haining Wang

In the last years, a remarkable theoretical effort has been made in order to understand stability and complexity in ecological communities. The non-random structures of real ecological interaction networks has been recognized as one key…

Populations and Evolution · Quantitative Biology 2013-01-09 Samir Suweis , Jacopo Grilli , Amos Maritan

We introduce a model of traveling agents ({\it e.g.} frugivorous animals) who feed on randomly located vegetation patches and disperse their seeds, thus modifying the spatial distribution of resources in the long term. It is assumed that…

Populations and Evolution · Quantitative Biology 2015-05-13 D. Boyer , O. López-Corona

Why are large, complex ecosystems stable? Both theory and simulations of current models predict the onset of instability with growing size and complexity, so for decades it has been conjectured that ecosystems must have some unidentified…

Populations and Evolution · Quantitative Biology 2016-08-11 Samuel Johnson , Virginia Domínguez-García , Luca Donetti , Miguel A. Muñoz

Species or population that proliferate faster than others become dominant in numbers. Catalysis allows catalytic sets within a molecular reaction network to dominate the non catalytic parts of the network by processing most of the available…

Cell Behavior · Quantitative Biology 2016-08-31 Rudolf Hanel

Biological organisms have to cope with stochastic variations in both the external environment and the internal population dynamics. Theoretical studies and laboratory experiments suggest that population diversification could be an effective…

Populations and Evolution · Quantitative Biology 2017-09-13 BingKan Xue , Stanislas Leibler

High-throughput sequencing techniques such as metagenomic and metatranscriptomic technologies allow cataloging of functional characteristics of microbial community members as well as their taxonomic identity. Such studies have found that a…

Populations and Evolution · Quantitative Biology 2019-06-24 Lee Worden

We consider the spatially inhomogeneous Moran model with seed-banks introduced in den Hollander and Nandan (2021). Populations comprising $active$ and $dormant$ individuals are structured in colonies labelled by $\mathbb{Z}^d,~d\geq 1$. The…

Probability · Mathematics 2023-02-23 Shubhamoy Nandan