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Species-sampling problems (SSPs) refer to a vast class of statistical problems calling for the estimation of (discrete) functionals of the unknown species composition of an unobservable population. A common feature of SSPs is their…

Methodology · Statistics 2024-02-13 Cecilia Balocchi , Federico Camerlenghi , Stefano Favaro

Ecological networks are often composed of different sub-communities (often referred to as modules). Identifying such modules has the potential to develop a better understanding of the assembly of ecological communities and to investigate…

Quantitative Methods · Quantitative Biology 2014-03-14 Carsten F. Dormann , Rouven Strauss

Unsupervised clustering, also known as natural clustering, stands for the classification of data according to their similarities. Here we study this problem from the perspective of complex networks. Mapping the description of data…

Data Analysis, Statistics and Probability · Physics 2012-08-22 Clara Granell , Sergio Gomez , Alex Arenas

Community structure is a key feature omnipresent in real-world network data. Plethora of methods have been proposed to reveal subsets of densely interconnected nodes using criteria such as the modularity index. These approaches have been…

Social and Information Networks · Computer Science 2026-01-21 Alexandre Cionca , Chun Hei Michael Chan , Dimitri Van De Ville

Detecting communities in networks and graphs is an important task across many disciplines such as statistics, social science and engineering. There are generally three different kinds of mixing patterns for the case of two communities:…

Methodology · Statistics 2023-10-10 Xiancheng Lin , Hao Chen

Bilinear inverse problems (BIPs), the resolution of two vectors given their image under a bilinear mapping, arise in many applications. Without further constraints, BIPs are usually ill-posed. In practice, properties of natural signals are…

Information Theory · Computer Science 2015-01-27 Yanjun Li , Kiryung Lee , Yoram Bresler

Controlling false positives (Type I errors) through statistical hypothesis testing is a foundation of modern scientific data analysis. Existing causal structure discovery algorithms either do not provide Type I error control or cannot scale…

Methodology · Statistics 2025-12-29 James Leiner , Brian Manzo , Aaditya Ramdas , Wesley Tansey

Modeling biological sequences such as DNA, RNA, and proteins is crucial for understanding complex processes like gene regulation and protein synthesis. However, most current models either focus on a single type or treat multiple types of…

Genomics · Quantitative Biology 2024-10-16 Weixi Xiang , Xueting Han , Xiujuan Chai , Jing Bai

Focusing on the bipartite Stable Marriage problem, we investigate different robustness measures related to stable matchings. We analyze the computational complexity of computing them and analyze their behavior in extensive experiments on…

Computer Science and Game Theory · Computer Science 2024-08-20 Kimon Boehmer , Niclas Boehmer

Simultaneous recordings from many neurons hide important information and the connections characterizing the network remain generally undiscovered despite the progresses of statistical and machine learning techniques. Discerning the presence…

Applications · Statistics 2019-03-21 Pietro Verzelli , Laura Sacerdote

With the routine collection of massive-dimensional predictors in many application areas, screening methods that rapidly identify a small subset of promising predictors have become commonplace. We propose a new MOdular Bayes Screening (MOBS)…

Methodology · Statistics 2017-03-30 Yuhan Chen , David B. Dunson

The success of many computer vision tasks lies in the ability to exploit the interdependency between different image modalities such as intensity and depth. Fusing corresponding information can be achieved on several levels, and one…

Computer Vision and Pattern Recognition · Computer Science 2014-06-26 Martin Kiechle , Tim Habigt , Simon Hawe , Martin Kleinsteuber

A number of ill-posed inverse problems in signal processing, like blind deconvolution, matrix factorization, dictionary learning and blind source separation share the common characteristic of being bilinear inverse problems (BIPs), i.e. the…

Information Theory · Computer Science 2014-11-11 Sunav Choudhary , Urbashi Mitra

The cross-media retrieval problem has received much attention in recent years due to the rapid increasing of multimedia data on the Internet. A new approach to the problem has been raised which intends to match features of different…

Multimedia · Computer Science 2015-12-18 Cuicui Kang , Shengcai Liao , Yonghao He , Jian Wang , Wenjia Niu , Shiming Xiang , Chunhong Pan

An instance of a strongly stable matching problem (SSMP) is an undirected bipartite graph $G=(A \cup B, E)$, with an adjacency list of each vertex being a linearly ordered list of ties, which are subsets of vertices equally good for a given…

Data Structures and Algorithms · Computer Science 2015-06-03 Pratik Ghosal , Adam Kunysz , Katarzyna Paluch

Background: Current neuronal monitoring techniques, such as calcium imaging and multi-electrode arrays, enable recordings of spiking activity from hundreds of neurons simultaneously. Of primary importance in systems neuroscience is the…

Neurons and Cognition · Quantitative Biology 2014-11-11 Yazan N. Billeh , Michael T. Schaub , Costas A. Anastassiou , Mauricio Barahona , Christof Koch

High-dimensional phenotypes hold promise for richer findings in association studies, but testing of several phenotype traits aggravates the grand challenge of association studies, that of multiple testing. Several methods have recently been…

Methodology · Statistics 2013-05-14 Pekka Marttinen , Jussi Gillberg , Aki Havulinna , Jukka Corander , Samuel Kaski

Community detection or clustering is a fundamental task in the analysis of network data. Many real networks have a bipartite structure which makes community detection challenging. In this paper, we consider a model which allows for matched…

Social and Information Networks · Computer Science 2017-03-16 Zahra S. Razaee , Arash A. Amini , Jingyi Jessica Li

An applied problem facing all areas of data science is harmonizing data sources. Joining data from multiple origins with unmapped and only partially overlapping features is a prerequisite to developing and testing robust, generalizable…

Motivation: Modelling methods that find structure in data are necessary with the current large volumes of genomic data, and there have been various efforts to find subsets of genes exhibiting consistent patterns over subsets of treatments.…

Machine Learning · Computer Science 2016-09-15 Kerstin Bunte , Eemeli Leppäaho , Inka Saarinen , Samuel Kaski