Related papers: Finding Groups of Cross-Correlated Features in Bi-…
Clustering is an essential technique for discovering patterns in data. The steady increase in amount and complexity of data over the years led to improvements and development of new clustering algorithms. However, algorithms that can…
We investigate five English NLP benchmark datasets (on the superGLUE leaderboard) and two Swedish datasets for bias, along multiple axes. The datasets are the following: Boolean Question (Boolq), CommitmentBank (CB), Winograd Schema…
The paper is motivated from clustering problem in high-throughput mixed datasets. Clustering of such datasets can provide much insight into biological associations. An open problem in this context is to simultaneously cluster…
Many complex systems present an intrinsic bipartite nature and are often described and modeled in terms of networks [1-5]. Examples include movies and actors [1, 2, 4], authors and scientific papers [6-9], email accounts and emails [10],…
Clustering has long been a popular unsupervised learning approach to identify groups of similar objects and discover patterns from unlabeled data in many applications. Yet, coming up with meaningful interpretations of the estimated clusters…
Multiple types or views of data (e.g. genetics, proteomics) measured on the same set of individuals are now popularly generated in many biomedical studies. A particular interest might be the detection of sample subgroups (e.g. subtypes of…
Bipartite networks are widely used to encode the ecological interactions. Being able to compare the organization of bipartite networks is a first step toward a better understanding of how environmental factors shape community structure and…
When fitting statistical models, some predictors are often found to be correlated with each other, and functioning together. Many group variable selection methods are developed to select the groups of predictors that are closely related to…
Feature selection is one of the most prominent learning tasks, especially in high-dimensional datasets in which the goal is to understand the mechanisms that underly the learning dataset. However most of them typically deliver just a flat…
One of the main reasons for topological persistence being useful in data analysis is that it is backed up by a stability (isometry) property: persistence diagrams of $1$-parameter persistence modules are stable in the sense that the…
Bipartite graphs are widely used to model relationships between entities of different types, where nodes are divided into two disjoint sets. Similarity search, a fundamental operation that retrieves nodes similar to a given query node,…
There is a growing need for unbiased clustering methods, ideally automated. We have developed a topology-based analysis tool called Two-Tier Mapper (TTMap) to detect subgroups in global gene expression datasets and identify their…
Selecting subsets of features that differentiate between two conditions is a key task in a broad range of scientific domains. In many applications, the features of interest form clusters with similar effects on the data at hand. To recover…
Many datasets take the form of a bipartite graph where two types of nodes are connected by relationships, like the movies watched by a user or the tags associated with a file. The partitioning of the bipartite graph could be used to fasten…
In many submodular optimization applications, datasets are naturally partitioned into disjoint subsets. These scenarios give rise to submodular optimization problems with partition-based constraints, where the desired solution set should be…
We present ModMap, a natively multiview and multimodal framework for 3D anomaly detection and segmentation. Unlike existing methods that process views independently, our method draws inspiration from the crossmodal feature mapping paradigm…
Earlier we introduced the notion of a stable set of points (SSP). We proved that a CNF formula is unsatisfiable iff there is a set of points (i.e. complete assignments) that is stable with respect to this formula. Experiments showed that…
Disease subtype identification (clustering) is an important problem in biomedical research. Gene expression profiles are commonly utilized to infer disease subtypes, which often lead to biologically meaningful insights into disease. Despite…
Here we propose a new method to compare the modular structure of a pair of node-aligned networks. The majority of current methods, such as normalized mutual information, compare two node partitions derived from a community detection…
We show how matrix problems (bimodule categories) can be used in studying triangulated categories. Then we apply the general technique to the classification of stable homotopy types of polyhedra, find out the "representation types" of such…