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A major challenge in cognitive neuroscience is to evaluate the ability of the human brain to categorize or group visual stimuli based on common features. This categorization process is very fast and occurs in few hundreds of millisecond…

Neurons and Cognition · Quantitative Biology 2016-06-06 Ahmad Mheich , Mahmoud Hassan , Olivier Dufor , Mohamad Khalil , Fabrice Wendling

In this study, we propose a neural network approach to capture the functional connectivities among anatomic brain regions. The suggested approach estimates a set of brain networks, each of which represents the connectivity patterns of a…

Computer Vision and Pattern Recognition · Computer Science 2018-07-24 Baran Baris Kivilcim , Itir Onal Ertugrul , Fatos T. Yarman Vural

We devise a machine learning technique to solve the general problem of inferring network links that have time-delays. The goal is to do this purely from time-series data of the network nodal states. This task has applications in fields…

Adaptation and Self-Organizing Systems · Physics 2021-07-28 Amitava Banerjee , Joseph D. Hart , Rajarshi Roy , Edward Ott

The predictive power of neural networks often costs model interpretability. Several techniques have been developed for explaining model outputs in terms of input features; however, it is difficult to translate such interpretations into…

Machine Learning · Computer Science 2017-08-17 Benjamin J. Lengerich , Sandeep Konam , Eric P. Xing , Stephanie Rosenthal , Manuela Veloso

Objectives: Functional connectivity triggered by naturalistic stimulus (e.g., movies) and machine learning techniques provide a great insight in exploring the brain functions such as fluid intelligence. However, functional connectivity are…

Artificial Intelligence · Computer Science 2021-01-07 Xiaobo Liu , Su Yang

The increasing availability of multiple network data has highlighted the need for statistical models for heterogeneous populations of networks. A convenient framework makes use of metrics to measure similarity between networks. In this…

Methodology · Statistics 2026-03-09 Francesco Barile , Simón Lunagómez , Bernardo Nipoti

We study pairwise Ising models for describing the statistics of multi-neuron spike trains, using data from a simulated cortical network. We explore efficient ways of finding the optimal couplings in these models and examine their…

Quantitative Methods · Quantitative Biology 2009-05-21 Yasser Roudi , Joanna Tyrcha , John Hertz

Inferring the connectivity structure of networked systems from data is an extremely important task in many areas of science. Most of real-world networks exhibit sparsely connected topologies, with links between nodes that in some cases may…

Physics and Society · Physics 2022-06-02 Lei Shi , Chen Shen , Libin Jin , Qi Shi , Zhen Wang , Marko Jusup , Stefano Boccaletti

Visual sentiment analysis has received increasing attention in recent years. However, the dataset's quality is a concern because the sentiment labels are crowd-sourcing, subjective, and prone to mistakes, and poses a severe threat to the…

Computer Vision and Pattern Recognition · Computer Science 2022-01-28 Wei Zhu , Zihe Zheng , Haitian Zheng , Hanjia Lyu , Jiebo Luo

There is a growing literature on the statistical analysis of multiple networks in which the network is the fundamental data object. However, most of this work requires networks on a shared set of labeled vertices. In this work, we consider…

Methodology · Statistics 2022-03-21 Nathaniel Josephs , Wenrui Li , Eric D. Kolaczyk

Sparse regression has been a popular approach to perform variable selection and enhance the prediction accuracy and interpretability of the resulting statistical model. Existing approaches focus on offline regularized regression, while the…

Machine Learning · Statistics 2023-01-03 Shuoguang Yang , Yuhao Yan , Xiuneng Zhu , Qiang Sun

A pervasive challenge in neuroscience is testing whether neuronal connectivity changes over time due to specific causes, such as stimuli, events, or clinical interventions. Recent hardware innovations and falling data storage costs enable…

Neurons and Cognition · Quantitative Biology 2024-01-05 Johan Medrano , Karl J. Friston , Peter Zeidman

Objective: Modelling the associations from high-throughput experimental molecular data has provided unprecedented insights into biological pathways and signalling mechanisms. Graphical models and networks have especially proven to be useful…

Machine Learning · Statistics 2013-04-24 Marco Scutari , Radhakrishnan Nagarajan

When multitudes of features can plausibly be associated with a response, both privacy considerations and model parsimony suggest grouping them to increase the predictive power of a regression model. Specifically, the identification of…

Methodology · Statistics 2024-05-07 Brandon Woosuk Park , Anand N. Vidyashankar , Tucker S. McElroy

The characterisation of neuronal connectivity is one of the most important matters in neuroscience. In this work, we show that a recently proposed informational quantity, the causal mutual information, employed with an appropriate…

Neurons and Cognition · Quantitative Biology 2018-02-14 F. S. Borges , E. L. Lameu , K. C. Iarosz , P. R. Protachevicz , I. L. Caldas , R. L. Viana , E. E. N. Macau , A. M. Batista , M. S. Baptista

In this work we explore encoding strategies learned by statistical models of sensory coding in noisy spiking networks. Early stages of sensory communication in neural systems can be viewed as encoding channels in the information-theoretic…

Neurons and Cognition · Quantitative Biology 2020-06-30 M. E. Rule , M. Sorbaro , M. H. Hennig

In neural networks with identical neurons, the matrix of connection weights completely describes the network structure and thereby determines how it is processing information. However, due to the non-linearity of these systems, it is not…

Neurons and Cognition · Quantitative Biology 2018-11-14 Patrick Krauss , Alexandra Zankl , Achim Schilling , Holger Schulze , Claus Metzner

This paper proposes a new statistical approach for assessing treatment effect using Bayesian Networks (BNs). The goal is to draw causal inferences from observational data with a binary outcome and discrete covariates. The BNs are here used…

Inferring directional couplings from the spike data of networks is desired in various scientific fields such as neuroscience. Here, we apply a recently proposed objective procedure to the spike data obtained from the Hodgkin--Huxley type…

Neurons and Cognition · Quantitative Biology 2020-01-29 Yu Terada , Tomoyuki Obuchi , Takuya Isomura , Yoshiyuki Kabashima

Neural field models represent neuronal communication on a population level via synaptic weight functions. Using voltage sensitive dye (VSD) imaging it is possible to obtain measurements of neural fields with a relatively high spatial and…

Methodology · Statistics 2020-07-29 Adam Lund , Niels Richard Hansen
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