English
Related papers

Related papers: Online neural connectivity estimation with ensembl…

200 papers

In this paper, we explore the possibilities and limitations of recovering sparse signals in an online fashion. Employing a mean field approximation to the Bayes recursion formula yields an online signal recovery algorithm that can be…

Information Theory · Computer Science 2016-09-21 Paulo V. Rossi , Yoshiyuki Kabashima , Jun-ichi Inoue

We consider the problem of inferring the functional connectivity of a large-scale computer network from sparse time series of events emitted by its nodes. We do so under the following three domain-specific constraints: (a) non-stationarity…

Machine Learning · Computer Science 2018-02-13 Antoine Messager , George Parisis , Istvan Z Kiss , Robert Harper , Phil Tee , Luc Berthouze

Recurrent networks of dynamic elements frequently exhibit emergent collective oscillations, which can display substantial regularity even when the individual elements are considerably noisy. How noise-induced dynamics at the local level…

Adaptation and Self-Organizing Systems · Physics 2017-01-04 Belen Sancristobal , Beatriz Rebollo , Pol Boada , Maria V. Sanchez-Vives , Jordi Garcia-Ojalvo

The study of random networks in a neuroscientific context has developed extensively over the last couple of decades. By contrast, techniques for the statistical analysis of these networks are less developed. In this paper, we focus on the…

Neurons and Cognition · Quantitative Biology 2017-07-11 Daniel Fraiman , Ricardo Fraiman

Neural systems can be modeled as networks of functionally connected neural elements. The resulting network can be analyzed using mathematical tools from network science and graph theory to quantify the system's topological organization and…

Neurons and Cognition · Quantitative Biology 2020-07-01 Richard F. Betzel , Katherine C. Wood , Christopher Angeloni , Maria Neimark Geffen , Danielle S. Bassett

Connectomics is an emerging field in neuroscience that aims to reconstruct the 3-dimensional morphology of neurons from electron microscopy (EM) images. Recent studies have successfully demonstrated the use of convolutional neural networks…

Computer Vision and Pattern Recognition · Computer Science 2017-02-27 Shibani Santurkar , David Budden , Alexander Matveev , Heather Berlin , Hayk Saribekyan , Yaron Meirovitch , Nir Shavit

In this paper, we investigate community detection in networks in the presence of node covariates. In many instances, covariates and networks individually only give a partial view of the cluster structure. One needs to jointly infer the full…

Methodology · Statistics 2018-04-26 Bowei Yan , Purnamrita Sarkar

Design of experiments and estimation of treatment effects in large-scale networks, in the presence of strong interference, is a challenging and important problem. Most existing methods' performance deteriorates as the density of the network…

Methodology · Statistics 2020-12-15 Preetam Nandy , Kinjal Basu , Shaunak Chatterjee , Ye Tu

A white noise analysis of modern deep neural networks is presented to unveil their biases at the whole network level or the single neuron level. Our analysis is based on two popular and related methods in psychophysics and neurophysiology…

Computer Vision and Pattern Recognition · Computer Science 2019-12-30 Ali Borji , Sikun Lin

Networks capture our intuition about relationships in the world. They describe the friendships between Facebook users, interactions in financial markets, and synapses connecting neurons in the brain. These networks are richly structured…

Machine Learning · Statistics 2015-07-14 Scott W. Linderman , Ryan P. Adams

This paper develops a framework for identification, estimation, and inference on the causal mechanisms driving endogenous social network formation. Identification is challenging because of unobserved confounders and reverse causality;…

Econometrics · Economics 2026-04-21 Maximilian Kasy , Elizabeth Linos , Sanaz Mobasseri

Given the ubiquity of modularity in biological systems, module-level regulation analysis is vital for understanding biological systems across various levels and their dynamics. Current statistical analysis on biological modules…

Methodology · Statistics 2025-03-24 Yaoming Zhen , Jin-Hong Du

Recent advances in associative memory design through structured pattern sets and graph-based inference algorithms have allowed reliable learning and recall of an exponential number of patterns. Although these designs correct external errors…

Neural and Evolutionary Computing · Computer Science 2014-03-14 Amin Karbasi , Amir Hesam Salavati , Amin Shokrollahi , Lav R. Varshney

During periods of quiescence, such as sleep, neural activity in many brain circuits resembles that observed during periods of task engagement. However, the precise conditions under which task-optimized networks can autonomously reactivate…

Neurons and Cognition · Quantitative Biology 2025-05-23 Nanda H. Krishna , Colin Bredenberg , Daniel Levenstein , Blake A. Richards , Guillaume Lajoie

In this paper, we consider sparse networks consisting of a finite number of non-overlapping communities, i.e. disjoint clusters, so that there is higher density within clusters than across clusters. Both the intra- and inter-cluster edge…

Social and Information Networks · Computer Science 2014-11-06 Se-Young Yun , Marc Lelarge , Alexandre Proutiere

This study addresses the challenge of predicting network dynamics, such as forecasting disease spread in social networks or estimating species populations in predator-prey networks. Accurate predictions in large networks are difficult due…

Social and Information Networks · Computer Science 2023-08-23 Rui Luo

The network reconstruction task aims to estimate a complex system's structure from various data sources such as time series, snapshots, or interaction counts. Recent work has examined this problem in networks whose relationships involve…

Social and Information Networks · Computer Science 2023-12-05 Simon Lizotte , Jean-Gabriel Young , Antoine Allard

This article is motivated by studying multisensory effects on brain activities in intracranial electroencephalography (iEEG) experiments. Differential brain activities to multisensory stimulus presentations are zero in most regions and…

Methodology · Statistics 2022-06-01 Zhengjia Wang , John Magnotti , Michael S. Beauchamp , Meng Li

Determining functional brain connectivity is crucial to understanding the brain and neural differences underlying disorders such as autism. Recent studies have used Gaussian graphical models to learn brain connectivity via statistical…

Neurons and Cognition · Quantitative Biology 2017-09-22 Chandan Singh , Beilun Wang , Yanjun Qi

Neural plasticity is an important functionality of human brain, in which number of neurons and synapses can shrink or expand in response to stimuli throughout the span of life. We model this dynamic learning process as an $L_0$-norm…

Neural and Evolutionary Computing · Computer Science 2021-05-04 Yang Li , Shihao Ji