Related papers: The Edit Distance to $k$-Subsequence Universality
Let L be an infinite regular language on a totally ordered alphabet (A,<). Feeding a finite deterministic automaton (with output) with the words of L enumerated lexicographically with respect to < leads to an infinite sequence over the…
Word segmentation is a low-level NLP task that is non-trivial for a considerable number of languages. In this paper, we present a sequence tagging framework and apply it to word segmentation for a wide range of languages with different…
Let $n$ and $k$ be positive integers, and let $F$ be an alphabet of size $n$. A sequence over $F$ of length $m$ is a \emph{$k$-radius sequence} if any two distinct elements of $F$ occur within distance $k$ of each other somewhere in the…
A double occurrence word $w$ over a finite alphabet $\Sigma$ is a word in which each alphabet letter appears exactly twice. Such words arise naturally in the study of topology, graph theory, and combinatorics. Recently, double occurrence…
We introduce the notion of expandability in the context of automaton semigroups and groups: a word is k-expandable if one can append a suffix to it such that the size of the orbit under the action of the automaton increases by at least k.…
Sequence classification algorithms, such as SVM, require a definition of distance (similarity) measure between two sequences. A commonly used notion of similarity is the number of matches between $k$-mers ($k$-length subsequences) in the…
A $k$-universal permutation, or $k$-superpermutation, is a permutation that contains all permutations of length $k$ as patterns. The problem of finding the minimum length of a $k$-superpermutation has recently received significant attention…
Construct recursively a long string of words w1. .. wn, such that at each step k, w k+1 is a new word with a fixed probability p $\in$ (0, 1), and repeats some preceding word with complementary probability 1 -- p. More precisely, given a…
Minimizers are sampling schemes with numerous applications in computational biology. Assuming a fixed alphabet of size $\sigma$, a minimizer is defined by two integers $k,w\ge2$ and a linear order $\rho$ on strings of length $k$ (also…
Given a dynamic set $K$ of $k$ strings of total length $n$ whose characters are drawn from an alphabet of size $\sigma$, a keyword dictionary is a data structure built on $K$ that provides locate, prefix search, and update operations on…
Covering arrays for words of length $t$ over a $d$ letter alphabet are $k \times n$ arrays with entries from the alphabet so that for each choice of $t$ columns, each of the $d^t$ $t$-letter words appears at least once among the rows of the…
It is shown that for finding rational approximates to m'th root of any integer to any accuracy one only needs the ability to count and to distinguish between m different classes of objects. To every integer N can be associated a…
We investigate the parameterized complexity of the graph editing problem called Editing to a Graph with a Given Degree Sequence, where the aim is to obtain a graph with a given degree sequence \sigma by at most k vertex or edge deletions…
Two words $w_1$ and $w_2$ are said to be $k$-binomial equivalent if every non-empty word $x$ of length at most $k$ over the alphabet of $w_1$ and $w_2$ appears as a scattered factor of $w_1$ exactly as many times as it appears as a…
We lift metrics over words to metrics over word-to-word transductions, by defining the distance between two transductions as the supremum of the distances of their respective outputs over all inputs. This allows to compare transducers…
Simon's congruence, denoted \sim_n, relates words having the same subwords of length up to n. We show that, over a k-letter alphabet, the number of words modulo \sim_n is in 2^{\Theta(n^{k-1} log n)}.
A deterministic finite automaton (DFA) separates two strings $w$ and $x$ if it accepts $w$ and rejects $x$. The minimum number of states required for a DFA to separate $w$ and $x$ is denoted by $sep(w,x)$. The present paper shows that the…
It is a classical fact that for any $\varepsilon > 0$, a random permutation of length $n = (1 + \varepsilon) k^2 / 4$ typically contains a monotone subsequence of length $k$. As a far-reaching generalization, Alon conjectured that a random…
Kosaraju in ``Computation of squares in a string'' briefly described a linear-time algorithm for computing the minimal squares starting at each position in a word. Using the same construction of suffix trees, we generalize his result and…
The approximate period recovery problem asks to compute all $\textit{approximate word-periods}$ of a given word $S$ of length $n$: all primitive words $P$ ($|P|=p$) which have a periodic extension at edit distance smaller than $\tau_p$ from…