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In this paper, we propose novel modulation techniques using isomers as messenger molecules for nano communication via diffusion. To evaluate achievable rate performance, we compare the proposed techniques with concentration-based and…

Quantitative Methods · Quantitative Biology 2012-01-05 Na-Rae Kim , Chan-Byoung Chae

Nanoparticle drug carriers play an important role in facilitating efficient targeted drug delivery, i.e., improving treatment success and reducing drug costs and side effects. However, the mobility of nanoparticle drug carriers poses a…

In this paper, we apply deep learning for communication over dispersive channels with power detection, as encountered in low-cost optical intensity modulation/direct detection (IM/DD) links. We consider an autoencoder based on the recently…

Information Theory · Computer Science 2019-10-03 Boris Karanov , Gabriele Liga , Vahid Aref , Domaniç Lavery , Polina Bayvel , Laurent Schmalen

This two-part paper studies a point-to-point resonant beam communication (RBCom) system, where two separately deployed retroreflectors are adopted to generate the resonant beam between the transmitter and the receiver, and analyzes the…

Information Theory · Computer Science 2024-03-26 Dongxu Li , Yuanming Tian , Chuan Huang , Qingwen Liu , Shengli Zhou

Supervised learning on molecules has incredible potential to be useful in chemistry, drug discovery, and materials science. Luckily, several promising and closely related neural network models invariant to molecular symmetries have already…

Machine Learning · Computer Science 2017-06-14 Justin Gilmer , Samuel S. Schoenholz , Patrick F. Riley , Oriol Vinyals , George E. Dahl

Learning representations for structured data with certain geometries (e.g., observed or unobserved) is a fundamental challenge, wherein message passing neural networks (MPNNs) have become a de facto class of model solutions. In this paper,…

Machine Learning · Computer Science 2025-07-02 Qitian Wu , David Wipf , Junchi Yan

This work proposes a novel channel estimator based on diffusion models (DMs), one of the currently top-rated generative models. Contrary to related works utilizing generative priors, a lightweight convolutional neural network (CNN) with…

Signal Processing · Electrical Eng. & Systems 2024-03-07 Benedikt Fesl , Michael Baur , Florian Strasser , Michael Joham , Wolfgang Utschick

The Internet of Bio-Nano Things (IoBNT), envisioned as a revolutionary healthcare paradigm, shows promise for epidemic control. This paper explores the potential of using molecular communication (MC) to address the challenges in…

Networking and Internet Architecture · Computer Science 2025-08-07 Xuan Chen , Yu Huang , Miaowen Wen , Shahid Mumtaz , Fatih Gulec , Anwer Al-Dulaimi , Andrew W. Eckford

A network of nanomachines (NMs) can be used to build a target detection system for a variety of promising applications. They have the potential to detect toxic chemicals, infectious bacteria, and biomarkers of dangerous diseases such as…

Information Theory · Computer Science 2024-01-10 Nithin V. Sabu , Abhishek K. Gupta

Diffusion generative models have emerged as a powerful framework for addressing problems in structural biology and structure-based drug design. These models operate directly on 3D molecular structures. Due to the unfavorable scaling of…

Biomolecules · Quantitative Biology 2024-05-10 Ian Dunn , David Ryan Koes

New ideas and technologies adopted by a small number of individuals occasionally spread globally through a complex web of social ties. Here, we present a simple and general approximation method, namely, a message-passing approach, that…

Physics and Society · Physics 2022-09-01 Teruyoshi Kobayashi , Tomokatsu Onaga

In this paper, we propose a new Multiple-Input Multiple-Output (MIMO) Molecular Communication (MC) system where multiple types of molecules are utilized for transmission and reception of information. We call the proposed framework as…

Signal Processing · Electrical Eng. & Systems 2019-08-19 Hamid Khoshfekr Rudsari , Mohammad Reza Javan , Mahdi Orooji , Nader Mokari , Eduard A. Jorswieck

Diffusion-based molecular communication over nanonetworks is an emerging communication paradigm that enables nanomachines to communicate by using molecules as the information carrier. For such a communication paradigm, Concentration Shift…

Information Theory · Computer Science 2014-01-20 Subodh Pudasaini , Seokjoo Shin , Kyung Sup Kwak

Diffusion models have demonstrated powerful data generation capabilities in various research fields such as image generation. However, in the field of vibration signal generation, the criteria for evaluating the quality of the generated…

Machine Learning · Computer Science 2024-07-02 Haiming Yi , Lei Hou , Yuhong Jin , Nasser A. Saeed , Ali Kandil , Hao Duan

In this work, we describe the first modular, and programmable platform capable of transmitting a text message using chemical signalling -- a method also known as molecular communication. This form of communication is attractive for…

Emerging Technologies · Computer Science 2014-03-05 Nariman Farsad , Weisi Guo , Andrew W. Eckford

This work presents a new multi-chemical experimental platform for molecular communication where the transmitter can release different chemicals. This platform is designed to be inexpensive and accessible, and it can be expanded to simulate…

Emerging Technologies · Computer Science 2017-04-18 Nariman Farsad , David Pan , Andrea Goldsmith

A practical, biologically motivated case of protein complexes (immunoglobulin G and FcRII receptors) moving on the surface of mastcells, that are common parts of an immunological system, is investigated. Proteins are considered as…

Molecular Networks · Quantitative Biology 2018-02-16 Jakub Kmiecik , Pawel Kulakowski , Krzysztof Wojcik , Andrzej Jajszczyk

To accomplish relatively complex tasks, in Internet of Bio-Nano Things (IoBNT), information collected by different nano-machines (NMs) is usually sent via multiple-access channels to fusion centers (FCs) for further processing. Relying on…

Information Theory · Computer Science 2024-02-27 Weidong Gao , Lu Shi , Lie-Liang Yang

This paper focuses on molecular communication (MC) systems using two types of signaling molecules which may participate in a reversible bimolecular reaction in the channel. The motivation for studying these MC systems is that they can…

Information Theory · Computer Science 2019-07-25 Vahid Jamali , Nariman Farsad , Robert Schober , Andrea Goldsmith

Reaction-diffusion (Turing) systems are fundamental to the formation of spatial patterns in nature and engineering. These systems are governed by a set of non-linear partial differential equations containing parameters that determine the…

Machine Learning · Computer Science 2022-11-28 Jordon Kho , Winston Koh , Jian Cheng Wong , Pao-Hsiung Chiu , Chin Chun Ooi