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Large ontologies still pose serious challenges to state-of-the-art ontology alignment systems. In the paper we present an approach that combines a lexical index, a neural embedding model and locality modules to effectively divide an input…

Artificial Intelligence · Computer Science 2018-06-01 Ernesto Jimenez-Ruiz , Asan Agibetov , Matthias Samwald , Valerie Cross

Exponential growth in heterogeneous healthcare data arising from electronic health records (EHRs), medical imaging, wearable sensors, and biomedical research has accelerated the adoption of data lakes and centralized architectures capable…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-10-08 Ritesh Chandra , Sonali Agarwal , Navjot Singh , Sadhana Tiwari

Recently, there has been a growing interest in Multimodal Large Language Models (MLLMs) due to their remarkable potential in various tasks integrating different modalities, such as image and text, as well as applications such as image…

Computer Vision and Pattern Recognition · Computer Science 2024-09-30 Jihen Amara , Birgitta König-Ries , Sheeba Samuel

Objective:Develop and validate an algorithm for analyzing the layout of PDF clinical documents to improve the performance of downstream natural language processing tasks. Materials and Methods: We designed an algorithm to process clinical…

Computation and Language · Computer Science 2023-05-24 Christel Gérardin , Perceval Wajsbürt , Basile Dura , Alice Calliger , Alexandre Moucher , Xavier Tannier , Romain Bey

Finding relevant literature underpins the practice of evidence-based medicine. From 2014 to 2016, TREC conducted a clinical decision support track, wherein participants were tasked with finding articles relevant to clinical questions posed…

Information Retrieval · Computer Science 2018-01-30 Vincent Nguyen , Sarvnaz Karimi , Sara Falamaki , Cecile Paris

As todays world grows with the technology on the other hand it seems to be small with the World Wide Web. With the use of Internet more and more information can be search from the web. When Users fires a query they want relevancy in…

Information Retrieval · Computer Science 2013-11-26 Debajyoti Mukhopadhyay , Sajeeda Shikalgar

The accurate extraction of clinical information from electronic medical records is particularly critical to clinical research but require much trained expertise and manual labor. In this study we developed a robust system for automated…

We investigate the task of inserting new concepts extracted from texts into an ontology using language models. We explore an approach with three steps: edge search which is to find a set of candidate locations to insert (i.e., subsumptions…

Computation and Language · Computer Science 2024-03-05 Hang Dong , Jiaoyan Chen , Yuan He , Yongsheng Gao , Ian Horrocks

Literary theme identification and interpretation is a focal point of literary studies scholarship. Classical forms of literary scholarship, such as close reading, have flourished with scarcely any need for commonly defined literary themes.…

Information Retrieval · Computer Science 2019-08-20 Paul Sheridan , Mikael Onsjö , Janna Hastings

We propose a novel framework to facilitate the on-demand design of data-centric systems by exploiting domain knowledge from an existing ontology. Its key ingredient is a process that we call focusing, which allows to obtain a schema for a…

Logic in Computer Science · Computer Science 2019-04-02 Tomasz Gogacz , Víctor Gutiérrez-Basulto , Yazmín A. Ibáñez-García , Filip Murlak , Magdalena Ortiz , Mantas Šimkus

One of the strongest signals for automated matching of ontologies and knowledge graphs are the textual descriptions of the concepts. The methods that are typically applied (such as character- or token-based comparisons) are relatively…

Computation and Language · Computer Science 2021-09-16 Sven Hertling , Jan Portisch , Heiko Paulheim

Biomedical ontology refers to a shared conceptualization for a biomedical domain of interest that has vastly improved data management and data sharing through the open data movement. The rapid growth and availability of biomedical data make…

Databases · Computer Science 2018-02-13 Feichen Shen , Yugyung Lee

We propose an ontology enhanced model for sentence based claim detection. We fused ontology embeddings from a knowledge base with BERT sentence embeddings to perform claim detection for the ClaimBuster and the NewsClaims datasets. Our…

Computation and Language · Computer Science 2024-02-20 Zehra Melce Hüsünbeyi , Tatjana Scheffler

Ontology alignment, a critical process in the Semantic Web for detecting relationships between different ontologies, has traditionally focused on identifying so-called "simple" 1-to-1 relationships through class labels and properties…

Artificial Intelligence · Computer Science 2024-07-24 Reihaneh Amini , Sanaz Saki Norouzi , Pascal Hitzler , Reza Amini

One primary goal of precision medicine is to estimate the individualized treatment rules (ITRs) that optimize patients' health outcomes based on individual characteristics. Health studies with multiple treatments are commonly seen in…

Methodology · Statistics 2025-05-07 Xuqiao Li , Qiuyan Zhou , Ying Wu , Ying Yan

We present the architecture and the evaluation of a new system for recognizing textual entailment (RTE). In RTE we want to identify automatically the type of a logical relation between two input texts. In particular, we are interested in…

Computation and Language · Computer Science 2013-10-21 Andreas Wotzlaw , Ravi Coote

An ontology makes a special vocabulary which describes the domain of interest and the meaning of the term on that vocabulary. Based on the precision of the specification, the concept of the ontology contains several data and conceptual…

Information Retrieval · Computer Science 2019-10-01 Maryam Alizadeh , Maliheh Heydarpour Shahrezaei , Farajollah Tahernezhad-Javazm

This decade has seen a great deal of progress in the development of information retrieval systems. Unfortunately, we still lack a systematic understanding of the behavior of the systems and their relationship with documents. In this paper…

Information Retrieval · Computer Science 2007-05-23 Myung Ho Kim

In this paper, we propose a framework of knowledge for an agriculture ontology which can be used for the purpose of smart agriculture systems. This ontology not only includes basic concepts in the agricultural domain but also contains…

Information Retrieval · Computer Science 2018-11-19 Quoc Hung Ngo , Nhien-An Le-Khac , Tahar Kechadi

The healthcare industry is moving towards a patient-centric paradigm that requires advanced methods for managing and representing patient data. This paper presents a Patient Journey Ontology (PJO), a framework that aims to capture the…

Databases · Computer Science 2025-06-25 Hassan S. Al Khatib , Subash Neupane , Sudip Mittal , Shahram Rahimi , Nina Marhamati , Sean Bozorgzad
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