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The challenge of recognizing named entities in a given text has been a very dynamic field in recent years. This is due to the advances in neural network architectures, increase of computing power and the availability of diverse labeled…

Computation and Language · Computer Science 2023-01-10 Nasi Jofche , Kostadin Mishev , Riste Stojanov , Milos Jovanovik , Dimitar Trajanov

We present a second-order language that can be used to succinctly specify ontologies in a consistent and transparent manner. This language is based on ontology templates (OTTR), a framework for capturing recurring patterns of axioms in…

Artificial Intelligence · Computer Science 2018-09-28 Henrik Forssell , Christian Kindermann , Daniel P. Lupp , Uli Sattler , Evgenij Thorstensen

The generative capabilities of LLM models offer opportunities for accelerating tasks but raise concerns about the authenticity of the knowledge they produce. To address these concerns, we present a computational approach that evaluates the…

Artificial Intelligence · Computer Science 2025-03-25 Ahmed Abdeen Hamed , Alessandro Crimi , Magdalena M. Misiak , Byung Suk Lee

The representation of workflows and processes is essential in materials science engineering, where experimental and computational reproducibility depend on structured and semantically coherent process models. Although numerous ontologies…

Information Retrieval · Computer Science 2025-09-30 Ebrahim Norouzi , Sven Hertling , Jörg Waitelonis , Harald Sack

Today's conventional search engines hardly do provide the essential content relevant to the user's search query. This is because the context and semantics of the request made by the user is not analyzed to the full extent. So here the need…

Information Retrieval · Computer Science 2012-07-25 Swathi Rajasurya , Tamizhamudhu Muralidharan , Sandhiya Devi , S. Swamynathan

Graph knowledge models and ontologies are very powerful modeling and re asoning tools. We propose an effective approach to model network attacks and attack prediction which plays important roles in security management. The goals of this…

Artificial Intelligence · Computer Science 2013-04-04 Ahmad Salahi , Morteza Ansarinia

Retrieving and extracting knowledge from extensive research documents and large databases presents significant challenges for researchers, students, and professionals in today's information-rich era. Existing retrieval systems, which rely…

Information Retrieval · Computer Science 2025-02-06 Mohammed-Khalil Ghali , Abdelrahman Farrag , Daehan Won , Yu Jin

Precision rehabilitation offers the promise of an evidence-based approach for optimizing individual rehabilitation to improve long-term functional outcomes. Emerging techniques, including those driven by artificial intelligence, are rapidly…

Quantitative Methods · Quantitative Biology 2024-11-07 R. James Cotton , Bryant A. Seamon , Richard L. Segal , Randal D. Davis , Amrita Sahu , Michelle M. McLeod , Pablo Celnik , Sharon L. Ramey

This contribution summarizes the participation of the UNIMIB team to the TREC 2021 Clinical Trials Track. We have investigated the effect of different query representations combined with several retrieval models on the retrieval…

Information Retrieval · Computer Science 2022-07-28 Georgios Peikos , Oscar Espitia , Gabriella Pasi

Target identification for tractography studies requires solid anatomical knowledge validated by an extensive literature review across species for each seed structure to be studied. Manual literature review to identify targets for a given…

Background: Ontologies are fundamental components of informatics infrastructure in domains such as biomedical, environmental, and food sciences, representing consensus knowledge in an accurate and computable form. However, their…

This work presents the architecture used in the ongoing OntologyNavigator project. It is a research tool to help advanced learners to find adapted IT papers to create scientific bibliographies. The purpose is the use of an IT representation…

Information Retrieval · Computer Science 2012-02-07 Gérald Kembellec , Imad Saleh , Catherine Sauvaget

A systematic review identifies and collates various clinical studies and compares data elements and results in order to provide an evidence based answer for a particular clinical question. The process is manual and involves lot of time. A…

Information Retrieval · Computer Science 2016-06-22 Tanmay Basu , Shraman Kumar , Abhishek Kalyan , Priyanka Jayaswal , Pawan Goyal , Stephen Pettifer , Siddhartha R. Jonnalagadda

A computational challenge to validate the candidate disease genes identified in a high-throughput genomic study is to elucidate the associations between the set of candidate genes and disease phenotypes. The conventional gene set enrichment…

Genomics · Quantitative Biology 2011-02-22 TaeHyun Hwang , Wei Zhang , Maoqiang Xie , Rui Kuang

Ontologies play a critical role in Semantic Web technologies by providing a structured and standardized way to represent knowledge and enabling machines to understand the meaning of data. Several taxonomies and ontologies have been…

Digital Libraries · Computer Science 2023-05-09 Mahender Kumar , Ruby Rani , Mirko Botarelli , Gregory Epiophaniou , Carsten Maple

The use of domain knowledge is generally found to improve query efficiency in content filtering applications. In particular, tangible benefits have been achieved when using knowledge-based approaches within more specialized fields, such as…

Information Retrieval · Computer Science 2015-03-17 Pekka Malo , Pyry Siitari , Oskar Ahlgren , Jyrki Wallenius , Pekka Korhonen

Traditional information retrieval systems rely on keywords to index documents and queries. In such systems, documents are retrieved based on the number of shared keywords with the query. This lexical-focused retrieval leads to inaccurate…

Information Retrieval · Computer Science 2013-03-08 Fatiha Boubekeur , Wassila Azzoug

The DRAGUN Track at TREC 2025 targets the growing need for effective support tools that help users evaluate the trustworthiness of online news. We describe the UR_Trecking system submitted for both Task 1 (critical question generation) and…

Information Retrieval · Computer Science 2026-03-25 Ignacy Alwasiak , Kene Nnolim , Jaclyn Thi , Samy Ateia , Markus Bink , Gregor Donabauer , David Elsweiler , Udo Kruschwitz

The research explores the utilization of a deep learning model employing an attention mechanism in medical text mining. It targets the challenge of analyzing unstructured text information within medical data. This research seeks to enhance…

Computation and Language · Computer Science 2024-06-04 Lingxi Xiao , Muqing Li , Yinqiu Feng , Meiqi Wang , Ziyi Zhu , Zexi Chen

Recommendation system plays an important role in online web applications. Sequential recommender further models user short-term preference through exploiting information from latest user-item interaction history. Most of the sequential…

Information Retrieval · Computer Science 2020-09-14 Ye Tao , Can Wang , Lina Yao , Weimin Li , Yonghong Yu
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