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Finding concepts in large clinical ontologies can be challenging when queries use different vocabularies. A search algorithm that overcomes this problem is useful in applications such as concept normalisation and ontology matching, where…

Computation and Language · Computer Science 2022-01-04 Duy-Hoa Ngo , Madonna Kemp , Donna Truran , Bevan Koopman , Alejandro Metke-Jimenez

This article presents a concept model, and the associated tool to help advanced learners to find adapted bibliography. The purpose is the use of an IT representation as educational research software for newcomers in research. We use an…

Digital Libraries · Computer Science 2012-02-07 Gérald Kembellec , Imad Saleh , Catherine Sauvaget

Considering the high heterogeneity of the ontologies pub-lished on the web, ontology matching is a crucial issue whose aim is to establish links between an entity of a source ontology and one or several entities from a target ontology.…

Artificial Intelligence · Computer Science 2015-01-26 Amira Essaid , Arnaud Martin , Grégory Smits , Boutheina Ben Yaghlane

The SemanticWeb emerged as an extension to the traditional Web, towards adding meaning to a distributed Web of structured and linked data. At its core, the concept of ontology provides the means to semantically describe and structure…

Artificial Intelligence · Computer Science 2021-05-03 Konstantinos Sikelis , George E Tsekouras , Konstantinos I Kotis

Slot filling is a fundamental task in dialog state tracking in task-oriented dialog systems. In multi-domain task-oriented dialog system, user utterances and system responses may mention multiple named entities and attributes values. A…

Computation and Language · Computer Science 2021-08-26 Yuhao Ding , Yik-Cheung Tam

AI-driven precision oncology has the transformative potential to reshape cancer treatment by leveraging the power of AI models to analyze the interaction between complex patient characteristics and their corresponding treatment outcomes.…

This report argues that, even in the simplest cases, IE is an ontology-driven process. It is not a mere text filtering method based on simple pattern matching and keywords, because the extracted pieces of texts are interpreted with respect…

Artificial Intelligence · Computer Science 2016-08-16 Claire Nédellec , Adeline Nazarenko

The surging amount of biomedical literature & digital clinical records presents a growing need for text mining techniques that can not only identify but also semantically relate entities in unstructured data. In this paper we propose a text…

Computation and Language · Computer Science 2021-12-28 Hasham Ul Haq , Veysel Kocaman , David Talby

A typical IR system that delivers and stores information is affected by problem of matching between user query and available content on web. Use of Ontology represents the extracted terms in form of network graph consisting of nodes, edges,…

Information Retrieval · Computer Science 2017-03-23 Gagandeep Singh Narula , Vishal Jain

Ontologies are widely used for representing domain knowledge and meta data, playing an increasingly important role in Information Systems, the Semantic Web, Bioinformatics and many other domains. However, logical reasoning that ontologies…

Artificial Intelligence · Computer Science 2025-04-08 Jiaoyan Chen , Olga Mashkova , Fernando Zhapa-Camacho , Robert Hoehndorf , Yuan He , Ian Horrocks

Robust test collections are crucial for Information Retrieval research. Recently there is a growing interest in evaluating retrieval systems for domain-specific retrieval tasks, however these tasks often lack a reliable test collection with…

Information Retrieval · Computer Science 2022-08-16 Sophia Althammer , Sebastian Hofstätter , Suzan Verberne , Allan Hanbury

With the rapid advancements in cancer research, the information that is useful for characterizing disease, staging tumors, and creating treatment and survivorship plans has been changing at a pace that creates challenges when physicians try…

Biomedical ontologies, which comprehensively define concepts and relations for biomedical entities, are crucial for structuring and formalizing domain-specific information representations. Biomedical code mapping identifies similarity or…

Information Retrieval · Computer Science 2025-02-27 Hui Feng , Yuntzu Yin , Emiliano Reynares , Jay Nanavati

This paper presents a semantic system named OntMed for an ontology-based data integration of heterogeneous data sources to achieve interoperability between heterogeneous data sources. Our system is based on the quality criteria…

Databases · Computer Science 2023-07-04 Muhammad Fahad

We consider algorithm selection in the context of ad-hoc information retrieval. Given a query and a pair of retrieval methods, we propose a meta-learner that predicts how to combine the methods' relevance scores into an overall relevance…

Information Retrieval · Computer Science 2019-04-12 Siddhant Arora , Andrew Yates

In this work, we propose an advanced AI based grading system for OCT images. The proposed system is a very deep fully convolutional attentive classification network trained with end to end advanced transfer learning with online random…

Computer Vision and Pattern Recognition · Computer Science 2018-12-19 Mrinal Haloi

Decision support is a probabilistic and quantitative method designed for modeling problems in situations with ambiguity. Computer technology can be employed to provide clinical decision support and treatment recommendations. The problem of…

Artificial Intelligence · Computer Science 2018-12-06 Ying Shen , Joël Colloc , Armelle Jacquet-Andrieu , Ziyi Guo , Yong Liu

The electronic marketplace offers great potential for the recommendation of supplies. In the so called recommender systems, it is crucial to apply matchmaking strategies that faithfully satisfy the predicates specified in the demand, and…

Databases · Computer Science 2015-03-17 Angela Bonifati , Giansalvatore Mecca , Domenica Sileo , Gianvito Summa

Successful biomedical relation extraction can provide evidence to researchers and clinicians about possible unknown associations between biomedical entities, advancing the current knowledge we have about those entities and their inherent…

Information Retrieval · Computer Science 2020-04-22 Diana Sousa , Francisco M. Couto

This paper explores the integration of Large Language Models (LLMs) such as GPT-3.5 and GPT-4 into the ontology refinement process, specifically focusing on the OntoClean methodology. OntoClean, critical for assessing the metaphysical…

Artificial Intelligence · Computer Science 2024-03-26 Yihang Zhao , Neil Vetter , Kaveh Aryan