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Despite the recent development of methods dealing with partially observed epidemic dynamics (unobserved model coordinates, discrete and noisy outbreak data), limitations remain in practice, mainly related to the quantity of augmented data…

Applications · Statistics 2021-07-26 Romain Narci , Maud Delattre , Catherine Larédo , Elisabeta Vergu

Providing accurate and reliable predictions about the future of an epidemic is an important problem for enabling informed public health decisions. Recent works have shown that leveraging data-driven solutions that utilize advances in deep…

Machine Learning · Computer Science 2023-11-21 Harshavardhan Kamarthi , B. Aditya Prakash

Epidemic prediction is of practical significance in public health, enabling early intervention, resource allocation, and strategic planning. However, privacy concerns often hinder the sharing of health data among institutions, limiting the…

Social and Information Networks · Computer Science 2024-12-04 Chengpeng Fu , Tong Li , Hao Chen , Wen Du , Zhidong He

Super-resolution fluorescence microscopy, with a resolution beyond the diffraction limit of light, has become an indispensable tool to directly visualize biological structures in living cells at a nanometer-scale resolution. Despite…

Computer Vision and Pattern Recognition · Computer Science 2018-09-05 Yu Li , Fan Xu , Fa Zhang , Pingyong Xu , Mingshu Zhang , Ming Fan , Lihua Li , Xin Gao , Renmin Han

Absenteeism of elementary school children has been shown to be effective in the early detection of an incoming influenza epidemic within a given population. This paper introduces DESA, an R package designed to: 1) model an epidemic using…

Applications · Statistics 2026-03-11 Vinay Joshy , Zeny Feng , Lorna Deeth , Kayla Vanderkruk , Justin Slater

Influenza epidemics result in a public health and economic burden around the globe. Traditional surveillance techniques, which rely on doctor visits, provide data with a delay of 1-2 weeks. A means of obtaining real-time data and…

Populations and Evolution · Quantitative Biology 2019-04-11 Wendy K. Caldwell , Geoffrey Fairchild , Sara Y. Del Valle

Reliable and timely dengue predictions provide actionable lead time for targeted vector control and clinical preparedness, reducing preventable diseases and health-system costs in at-risk communities. Dengue forecasting often relies on…

Applications · Statistics 2025-12-01 Saman Hosseini , Lee W. Cohnstaedt , Caterina Scoglio

Conventional surveillance systems for monitoring infectious diseases, such as influenza, face challenges due to shortage of skilled healthcare professionals, remoteness of communities and absence of communication infrastructures.…

Machine Learning · Computer Science 2018-11-28 Oguzhan Gencoglu , Miikka Ermes

Predicting the evolution of diseases is challenging, especially when the data availability is scarce and incomplete. The most popular tools for modelling and predicting infectious disease epidemics are compartmental models. They stratify…

Machine Learning · Computer Science 2023-10-10 Esha Saha , Lam Si Tung Ho , Giang Tran

Background. Effectively communicating complex statistical model outputs is a major challenge in public health. This study introduces the FARSI approach (Fast, Accessible, Reliable, Secure, Informative) as a framework to enhance the…

Other Statistics · Statistics 2025-04-10 Mattia Stival , Lorenzo Schiavon , Gaia Bertarelli , Stefano Campostrini

In this article, we focus on the analysis of the potential factors driving the spread of influenza, and possible policies to mitigate the adverse effects of the disease. To be precise, we first invoke discrete Fourier transform (DFT) to…

Machine Learning · Computer Science 2019-12-09 Ziming Liu , Yixuan Wang , Zizhao Han , Dian Wu

In the context of Epidemic Intelligence, many Event-Based Surveillance (EBS) systems have been proposed in the literature to promote the early identification and characterization of potential health threats from online sources of any…

Information Retrieval · Computer Science 2023-03-31 Nejat Arinik , Roberto Interdonato , Mathieu Roche , Maguelonne Teisseire

The characteristics of influenza seasons varies substantially from year to year, posing challenges for public health preparation and response. Influenza forecasting is used to inform seasonal outbreak response, which can in turn potentially…

Applications · Statistics 2022-03-16 Nutcha Wattanachit , Evan L. Ray , Thomas C. McAndrew , Nicholas G. Reich

Stochastic infectious disease models capture uncertainty in public health outcomes and have become increasingly popular in epidemiological practice. However, calibrating these models to observed data is challenging with existing methods for…

Methodology · Statistics 2024-12-18 Prayag Chatha , Fan Bu , Jeffrey Regier , Evan Snitkin , Jon Zelner

Epidemic models are useful tools in the fight against infectious diseases, as they allow policy makers to test and compare various strategies to limit disease transmission while mitigating collateral damage on the economy. Epidemic models…

Populations and Evolution · Quantitative Biology 2021-08-18 Joseph D. Peterson , Ronojoy Adhikari

Depression places substantial pressure on mental health services, and many people describe their experiences outside clinical settings in high-volume user-generated text (e.g., online forums and social media). Automatically identifying…

Computation and Language · Computer Science 2026-04-28 Eliseo Bao , Anxo Perez , David Otero , Javier Parapar

Surveillance data serving for epidemic alert systems are typically fully aggregated in space. However, epidemics may be spatially heterogeneous, undergoing distinct dynamics in distinct regions of the surveillance area. We unveil this in…

Populations and Evolution · Quantitative Biology 2018-03-30 Pavel Polyakov , Cécile Souty , Pierre-Yves Böelle , Romulus Breban

The amount of data, manpower and capital required to understand, evaluate and agree on a group of symptoms for the elementary prognosis of pandemic diseases is enormous. In this paper, we present FedPandemic, a novel noise implementation…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-04-06 Aman Priyanshu , Rakshit Naidu

Long-term time series forecasting is a vital task and has a wide range of real applications. Recent methods focus on capturing the underlying patterns from one single domain (e.g. the time domain or the frequency domain), and have not taken…

Machine Learning · Computer Science 2023-08-28 Yuxiao Luo , Ziyu Lyu , Xingyu Huang

Causal inference has recently gained notable attention across various fields like biology, healthcare, and environmental science, especially within explainable artificial intelligence (xAI) systems, for uncovering the causal relationships…

Machine Learning · Computer Science 2025-01-13 Xiaofeng Xiao , Khawlah Alharbi , Pengyu Zhang , Hantang Qin , Xubo Yue
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