Related papers: An algorithm for bounding extremal functions of fo…
In this paper we address the constrained longest common subsequence problem. Given two sequences $X$, $Y$ and a constrained sequence $P$, a sequence $Z$ is a constrained longest common subsequence for $X$ and $Y$ with respect to $P$ if $Z$…
In this paper, we provide an efficient algorithm to construct almost optimal $(k,n,d)$-superimposed codes with runlength constraints. A $(k,n,d)$-superimposed code of length $t$ is a $t \times n$ binary matrix such that any two 1's in each…
Orientable sequences of order n are infinite periodic sequences with symbols drawn from a finite alphabet of size k with the property that any particular subsequence of length n occurs at most once in a period in either direction. They were…
We design $f$-edge fault-tolerant diameter oracles ($f$-FDOs). We preprocess a given graph $G$ on $n$ vertices and $m$ edges, and a positive integer $f$, to construct a data structure that, when queried with a set $F$ of $|F| \leq f$ edges,…
The dynamic time warping (dtw) distance is an established tool for mining time series data. The DTW-Mean problem consists of computing a series which minimizes the so-called Fr\'echet function, that is, the sum of squared dtw-distances to a…
In this paper we describe a randomized algorithm which returns a maximal spanning forest of an unknown {\em weighted} undirected graph making $O(n)$ $\mathsf{CUT}$ queries in expectation. For weighted graphs, this is optimal due to a result…
Consider a face F in an arrangement of n Jordan curves in the plane, no two of which intersect more than s times. We prove that the combinatorial complexity of F is O(\lambda_s(n)), O(\lambda_{s+1}(n)), and O(\lambda_{s+2}(n)), when the…
First, we prove tight bounds of $n 2^{\frac{1}{(t-2)!}\alpha(n)^{t-2} \pm O(\alpha(n)^{t-3})}$ on the extremal function of the forbidden pair of ordered sequences $(1 2 3 \ldots k)^t$ and $(k \ldots 3 2 1)^t$ using bounds on a class of…
Set Shaping Theory (SST) moves beyond the classical fixed-space model by constructing bijective mappings the original sequence set into structured regions of a larger sequence space. These shaped subsets are characterized by a reduced…
A recent and active line of work achieves tight lower bounds for fundamental problems under the Strong Exponential Time Hypothesis (SETH). A celebrated result of Backurs and Indyk (STOC'15) proves that the Edit Distance of two sequences of…
In this paper, we study the saturation function $\mathrm{Sat}(n,u)$ for sequences. Saturation for sequences was introduced by Anand, Geneson, Kaustav, and Tsai (2021), who proved that $\mathrm{Sat}(n,u)=O(n)$ for two-letter sequences $u$…
Given a DNF formula on n variables, the two natural size measures are the number of terms or size s(f), and the maximum width of a term w(f). It is folklore that short DNF formulas can be made narrow. We prove a converse, showing that…
We consider the performance of the Depth First Search (DFS) algorithm on the random graph $G\left(n,\frac{1+\epsilon}{n}\right)$, $\epsilon>0$ a small constant. Recently, Enriquez, Faraud and M\'enard [2] proved that the stack $U$ of the…
Generalised hypertree width ($ghw$) is a hypergraph parameter that is central to the tractability of many prominent problems with natural hypergraph structure. Computing $ghw$ of a hypergraph is notoriously hard. The decision version of the…
The maximum size of a binary code is studied as a function of its length N, minimum distance D, and minimum codeword weight W. This function B(N,D,W) is first characterized in terms of its exponential growth rate in the limit as N tends to…
In 2021, Gupta and Suzumura proposed a novel algorithm for enumerating all bounded-length simple cycles in directed graphs. In this work, we present concrete examples demonstrating that the proposed algorithm fails to enumerate certain…
A fundamental concept related to strings is that of repetitions. It has been extensively studied in many versions, from both purely combinatorial and algorithmic angles. One of the most basic questions is how many distinct squares, i.e.,…
Submodular functions are set functions mapping every subset of some ground set of size $n$ into the real numbers and satisfying the diminishing returns property. Submodular minimization is an important field in discrete optimization theory…
Conditional Gradient algorithms (aka Frank-Wolfe algorithms) form a classical set of methods for constrained smooth convex minimization due to their simplicity, the absence of projection steps, and competitive numerical performance. While…
It has been observed that many classical planning domains with atomic goals can be solved by means of a simple polynomial exploration procedure, called IW, that runs in time exponential in the problem width, which in these cases is bounded…