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Spline wavelet tight frames of Ron-Shen have been used widely in frame based image analysis and restorations. However, except for the tight frame property and the approximation order of the truncated series, there are few other properties…
For a fixed finite collection of graphs ${\cal F}$, the ${\cal F}$-M-DELETION problem asks, given an $n$-vertex input graph $G,$ for the minimum number of vertices that intersect all minor models in $G$ of the graphs in ${\cal F}$. by…
Cutwidth is a widely studied parameter that quantifies how well a graph can be decomposed along small edge-cuts. It complements pathwidth, which captures decomposition by small vertex separators, and it is well-known that cutwidth…
There are various approaches to exploiting "hidden structure" in instances of hard combinatorial problems to allow faster algorithms than for general unstructured or random instances. For SAT and its counting version #SAT, hidden structure…
We study the maximum weight perfect $f$-factor problem on any general simple graph $G=(V,E,w)$ with positive integral edge weights $w$, and $n=|V|$, $m=|E|$. When we have a function $f:V\rightarrow \mathbb{N}_+$ on vertices, a perfect…
In this paper, we introduce saturation and semisaturation functions of sequences, and we prove a number of fundamental results about these functions. Given a forbidden sequence $u$ with $r$ distinct letters, we say that a sequence $s$ on a…
The Damerau-Levenshtein distance between two sequences is the minimum number of operations (deletions, insertions, substitutions, and adjacent transpositions) required to convert one sequence into another. Notwithstanding a long history of…
Treewidth (tw) is an important parameter that, when bounded, yields tractability for many problems. For example, graph problems expressible in Monadic Second Order (MSO) logic and QUANTIFIED SAT or, more generally, QUANTIFIED CSP, are FPT…
In the paper, we present a high order fast algorithm with almost optimum memory for the Caputo fractional derivative, which can be expressed as a convolution of $u'(t)$ with the kernel $(t_n-t)^{-\alpha}$. In the fast algorithm, the…
Motivated by a host of recent applications requiring some amount of redundancy, frames are becoming a standard tool in the signal processing toolbox. In this paper, we study a specific class of frames, known as discrete Fourier transform…
An upper dominating set is a minimal dominating set in a graph. In the \textsc{Upper Dominating Set} problem, the goal is to find an upper dominating set of maximum size. We study the complexity of parameterized algorithms for \textsc{Upper…
Uniform sampling of simple graphs having a given degree sequence is a known problem with exponential complexity in the square of the mean degree. For undirected graphs, randomised approximation algorithms have nonetheless been shown to…
A sequence $\bfx=(x_1,\ldots,x_m)$ of elements of $\Z_n$ is called an \textit{$A$-weighted Davenport Z-sequence} if there exists $\bfa:=(a_1,\ldots,a_m)\in (A\cup\{0\})^m\setminus\bfzero_m$ such that $\sum_i a_ix_i=0$. Here…
In this paper, a robust sequential quadratic programming method for constrained optimization is generalized to problem with an {expectation} objective function {and} deterministic equality and inequality constraints. A stochastic line…
Computing the directed path-width of a directed graph is an NP-hard problem. Even for digraphs of maximum semi-degree 3 the problem remains hard. We propose a decomposition of an input digraph G=(V,A) by a number k of sequences with entries…
We show that for a number of parameterized problems for which only $2^{O(k)} n^{O(1)}$ time algorithms are known on general graphs, subexponential parameterized algorithms with running time $2^{O(k^{1-\frac{1}{1+\delta}} \log^2 k)}…
For a given graph G and integers b,f >= 0, let S be a subset of vertices of G of size b+1 such that the subgraph of G induced by S is connected and S can be separated from other vertices of G by removing f vertices. We prove that every…
Motivation: A pan-genome graph represents a collection of genomes and encodes sequence variations between them. It is a powerful data structure for studying multiple similar genomes. Sequence-to-graph alignment is an essential step for the…
We provide new algorithms and conditional hardness for the problem of estimating effective resistances in $n$-node $m$-edge undirected, expander graphs. We provide an $\widetilde{O}(m\epsilon^{-1})$-time algorithm that produces with high…
The d-neighborhood of a word W in the Levenshtein distance is the set of all words at distance at most d from W. Generating the neighborhood of a word W, or related sets of words such as the condensed neighborhood or the super-condensed…