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Zhang Neural Networks rely on convergent 1-step ahead finite difference formulas of which very few are known. Those which are known have been constructed in ad-hoc ways and suffer from low truncation error orders. This paper develops a…
This paper performs the analysis necessary to bound the running time of known, efficient algorithms for generating all longest common subsequences. That is, we bound the running time as a function of input size for algorithms with time…
Fourier series of smooth, non-periodic functions on $[-1,1]$ are known to exhibit the Gibbs phenomenon, and exhibit overall slow convergence. One way of overcoming these problems is by using a Fourier series on a larger domain, say $[-T,T]$…
We present algorithms for length-constrained maximum sum segment and maximum density segment problems, in particular, and the problem of finding length-constrained heaviest segments, in general, for a sequence of real numbers. Given a…
We describe an algorithm that takes as input a complex sequence $(u_n)$ given by a linear recurrence relation with polynomial coefficients along with initial values, and outputs a simple explicit upper bound $(v_n)$ such that $|u_n| \leq…
We study variants of the mean problem under the $p$-Dynamic Time Warping ($p$-DTW) distance, a popular and robust distance measure for sequential data. In our setting we are given a set of finite point sequences over an arbitrary metric…
We study sequential prediction of real-valued, arbitrary and unknown sequences under the squared error loss as well as the best parametric predictor out of a large, continuous class of predictors. Inspired by recent results from…
Tobasco et al. [Physics Letters A, 382:382-386, 2018; see https://doi.org/10.1016/j.physleta.2017.12.023] recently suggested that trajectories of ODE systems that optimize the infinite-time average of a certain observable can be localized…
We present an expected linear-time algorithm to construct the farthest-segment Voronoi diagram, given the sequence of its faces at infinity. This sequence forms a Davenport-Schinzel sequence of order 3 and it can be computed in O(n log n)…
The deviation of the observed frequency of a word $w$ from its expected frequency in a given sequence $x$ is used to determine whether or not the word is avoided. This concept is particularly useful in DNA linguistic analysis. The value of…
A border u of a word w is a proper factor of w occurring both as a prefix and as a suffix. The maximal unbordered factor of w is the longest factor of w which does not have a border. Here an O(n log n)-time with high probability (or O(n log…
Frequent sequence mining methods often make use of constraints to control which subsequences should be mined. A variety of such subsequence constraints has been studied in the literature, including length, gap, span, regular-expression, and…
We show that for any fixed integer $k \geq 0$, there exists an algorithm that computes the diameter and the eccentricies of all vertices of an input unweighted, undirected $n$-vertex graph of Euler genus at most $k$ in time \[…
Common intervals have been defined as a modelisation of gene clusters in genomes represented either as permutations or as sequences. Whereas optimal algorithms for finding common intervals in permutations exist even for an arbitrary number…
Classic similarity measures of strings are longest common subsequence and Levenshtein distance (i.e., the classic edit distance). A classic similarity measure of curves is dynamic time warping. These measures can be computed by simple…
Ritt-Wu's algorithm of characteristic sets is the most representative for triangularizing sets of multivariate polynomials. Pseudo-division is the main operation used in this algorithm. In this paper we present a new algorithmic scheme for…
The maximum common subtree isomorphism problem asks for the largest possible isomorphism between subtrees of two given input trees. This problem is a natural restriction of the maximum common subgraph problem, which is ${\sf NP}$-hard in…
We study the classical scheduling problem on parallel machines %with precedence constraints where the precedence graph has the bounded depth $h$. Our goal is to minimize the maximum completion time. We focus on developing approximation…
Given a lower envelope in the form of an arbitrary sequence $u$, let $LSP(u, d)$ denote the maximum length of any subsequence of $u$ that can be realized as the lower envelope of a set of polynomials of degree at most $d$. Let $sp(m, d)$…
In this paper, we study bounds on the minimum length of $(k,n,d)$-superimposed codes introduced by Agarwal et al. [1], in the context of Non-Adaptive Group Testing algorithms with runlength constraints. A $(k,n,d)$-superimposed code of…