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Purpose: Combining multi-site diffusion MRI (dMRI) data is hindered by inter-scanner variability, which confounds subsequent analysis. Previous harmonization methods require large, matched or traveling human subjects from multiple sites,…

Computer Vision and Pattern Recognition · Computer Science 2026-03-10 Hwihun Jeong , Qiang Liu , Kathryn E. Keenan , Elisabeth A. Wilde , Walter Schneider , Sudhir Pathak , Anthony Zuccolotto , Lauren J. O'Donnell , Lipeng Ning , Yogesh Rathi

Aggregating multi-site brain MRI data can enhance deep learning model training, but also introduces non-biological heterogeneity caused by site-specific variations (e.g., differences in scanner vendors, acquisition parameters, and imaging…

Computer Vision and Pattern Recognition · Computer Science 2026-01-14 Mengqi Wu , Yongheng Sun , Qianqian Wang , Pew-Thian Yap , Mingxia Liu

Computational pathology models that use digitized histopathology whole-slide images have the potential to become a cost-effective and scalable alternative to molecular assays for the prediction of genomic biomarkers, a key task in precision…

Quantitative Methods · Quantitative Biology 2026-03-03 Ekaterina Redekop , Eric Zimmermann , Ava P Amini , Alex X Lu , Neil Tenenholtz , James Brian Hall , Lorin Crawford , Kristen A Severson

A computationally inexpensive k.p-based interpolation scheme is developed that can extend the eigenvalues and momentum matrix elements of a sparsely sampled k-point grid into a densely sampled one. Dense sampling, often required to…

Materials Science · Physics 2017-03-23 Kristian Berland , Clas Persson

The key to dynamic or multi-contrast magnetic resonance imaging (MRI) reconstruction lies in exploring inter-frame or inter-contrast information. Currently, the unrolled model, an approach combining iterative MRI reconstruction steps with…

Image and Video Processing · Electrical Eng. & Systems 2023-09-26 Bingyu Xin , Meng Ye , Leon Axel , Dimitris N. Metaxas

Quantitative magnetic resonance imaging (qMRI) allows images to be compared across sites and time points, which is particularly important for assessing long-term conditions or for longitudinal studies. The multiparametric mapping (MPM)…

Signal Processing · Electrical Eng. & Systems 2024-10-24 Klara Baś , Christian Lambert , John Ashburner

Purpose: Magnetic Resonance Fingerprinting (MRF) is a relatively new approach that provides quantitative MRI measures using randomized acquisition. Extraction of physical quantitative tissue parameters is performed off-line, without the…

Medical Physics · Physics 2018-11-21 Gal Mazor , Lior Weizman , Assaf Tal , Yonina C. Eldar

Let $\xi = \{x^j\}_{j=1}^n$ be a grid of $n$ points in the $d$-cube ${\II}^d:=[0,1]^d$, and $\Phi = \{\phi_j\}_{j =1}^n$ a family of $n$ functions on ${\II}^d$. We define the linear sampling algorithm $L_n(\Phi,\xi,\cdot)$ for an…

Functional Analysis · Mathematics 2010-09-23 Dinh Dũng

Porous structures are intricate solid materials with numerous small pores, extensively used in fields like medicine, chemical engineering, and aerospace. However, the design of such structures using computer-aided tools is a time-consuming…

Graphics · Computer Science 2024-02-20 Gao Depeng , Gao Yang , Lin Hongwei

For nonlinear reduced-order models, especially for those with non-polynomial nonlinearities, the computational complexity still depends on the dimension of the original dynamical system. As a result, the reduced-order model loses its…

Numerical Analysis · Mathematics 2013-04-30 Zhu Wang

The problem of computing an exact experimental design that is optimal for the least-squares estimation of the parameters of a regression model is considered. We show that this problem can be solved via mixed-integer linear programming…

Computation · Statistics 2024-06-18 Radoslav Harman , Samuel Rosa

The multi-frontal direct solver is the state-of-the-art algorithm for the direct solution of sparse linear systems. This paper provides computational complexity and memory usage estimates for the application of the multi-frontal direct…

Numerical Analysis · Computer Science 2012-04-10 Nathan Collier , David Pardo , Maciej Paszynski , Victor M. Calo

Current popular methods for Magnetic Resonance Fingerprint (MRF) recovery are bottlenecked by the heavy computations of a matched-filtering step due to the growing size and complexity of the fingerprint dictionaries in multi-parametric…

Computer Vision and Pattern Recognition · Computer Science 2018-10-05 Mohammad Golbabaee , Zhouye Chen , Yves Wiaux , Mike Davies

The numerical simulation of the diffusion MRI signal arising from complex tissue micro-structures is helpful for understanding and interpreting imaging data as well as for designing and optimizing MRI sequences. The discretization of the…

Computational Engineering, Finance, and Science · Computer Science 2019-10-23 Van-Dang Nguyen , Massimiliano Leoni , Tamara Dancheva , Johan Jansson , Johan Hoffman , Demian Wassermann , Jing-Rebecca Li

Structured Kernel Interpolation (SKI) (Wilson et al. 2015) helps scale Gaussian Processes (GPs) by approximating the kernel matrix via interpolation at inducing points, achieving linear computational complexity. However, it lacks rigorous…

Machine Learning · Computer Science 2025-02-05 Alexander Moreno , Justin Xiao , Jonathan Mei

Simulations with high accuracy are an essential part of scientific research to accelerate the innovation process. They are especially useful for finding novel approaches or optimizing existing methods. Today, powerful software tools are…

Medical Physics · Physics 2022-08-31 Patrick Vogel , Martin A. Rückert , Thomas Kampf , Volker C. Behr

This paper proposes an image interpolation algorithm exploiting sparse representation for natural images. It involves three main steps: (a) obtaining an initial estimate of the high resolution image using linear methods like FIR filtering,…

Computer Vision and Pattern Recognition · Computer Science 2013-08-07 H. Lakshman , W. -Q Lim , H. Schwarz , D. Marpe , G. Kutyniok , T. Wiegand

In this paper, we present a nonlinear least-squares fitting algorithm using B-splines with free knots. Since its performance strongly depends on the initial estimation of the free parameters (i.e. the knots), we also propose a fast and…

Signal Processing · Electrical Eng. & Systems 2020-03-13 Péter Kovács , Andrea M. Fekete

The question of adaptive mesh generation for approximation by splines has been studied for a number of years by various authors. The results have numerous applications in computational and discrete geometry, computer aided geometric design,…

Numerical Analysis · Mathematics 2011-01-14 Yuliya Babenko

Previous research on the diagnosis of Bipolar disorder has mainly focused on resting-state functional magnetic resonance imaging. However, their accuracy can not meet the requirements of clinical diagnosis. Efficient multimodal fusion…

Computer Vision and Pattern Recognition · Computer Science 2024-01-17 Guoxin Wang , Sheng Shi , Shan An , Fengmei Fan , Wenshu Ge , Qi Wang , Feng Yu , Zhiren Wang