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(ABRIDGED) We report the genome sequencing of 139 wild-derived strains of D. melanogaster, representing 22 population samples from the sub-Saharan ancestral range of this species, along with one European population. Most genomes were…

Accurate recognition and re-identification of individual animals is essential for successful wildlife population monitoring. Traditional methods, such as leg banding of birds, are time consuming and invasive. Recent progress in artificial…

Computer Vision and Pattern Recognition · Computer Science 2025-10-13 Paula Maddigan , Andrew Lensen , Rachael C. Shaw

Gene drive alleles bias their own inheritance to offspring. They can fix in a wild-type population in spite of a fitness cost, and even lead to the eradication of the target population if the fitness cost is high. However, this outcome may…

Populations and Evolution · Quantitative Biology 2026-04-30 Léna Kläy , Léo Girardin , Florence Débarre , Vincent Calvez

To protect tropical forest biodiversity, we need to be able to detect it reliably, cheaply, and at scale. Automated species detection from passively recorded soundscapes via machine-learning approaches is a promising technique towards this…

Machine Learning · Computer Science 2022-10-18 Yuren Sun , Tatiana Midori Maeda , Claudia Solis-Lemus , Daniel Pimentel-Alarcon , Zuzana Burivalova

We explore the origin of a population of stars recently detected in the inner parsec of the Milky Way Nuclear Cluster (NC), which exhibit sub-solar metallicity and a higher rotation compared to the dominant population. Using…

Astrophysics of Galaxies · Physics 2020-09-29 Manuel Arca Sedda , Alessia Gualandris , Tuan Do , Anja Feldmeier-Krause , Nadine Neumayer , Denis Erkal

Gray wolves were reintroduced to Yellowstone National Park (YNP) in 1995. The population initially flourished, but since 2003 the population has experience significant reductions due to factors that may include disease-induced mortality,…

Populations and Evolution · Quantitative Biology 2014-08-29 Krystal Blanco , Kamal Barley , Anuj Mubayi

Most capture-recapture models assume that individuals either do not emigrate or emigrate permanently from the sampling area during the sampling period. This assumption is violated when individuals temporarily leave the sampling area and…

Applications · Statistics 2025-10-09 Katarina Skopalova , Jafet Osuna , Wei Zhang

Using the MOCCA code, we study the evolution of globular clusters (GCs) with multiple stellar populations. For this purpose, the MOCCA code has been significantly extended to take into account the formation of an enriched population of…

Astrophysics of Galaxies · Physics 2025-07-02 Mirek Giersz , Abbas Askar , Arkadiusz Hypki , Jongsuk Hong , Grzegorz Wiktorowicz , Lucas Hellstrom

As noninvasive sampling techniques for animal populations have become more popular, there has been increasing interest in the development of capture-recapture models that can accommodate both imperfect detection and misidentification of…

Quantitative Methods · Quantitative Biology 2015-02-04 Brett T. McClintock , Larissa L. Bailey , Brian P. Dreher , William A. Link

Parent selection methods are widely used in evolutionary computation to accelerate the optimization process, yet their theoretical benefits are still poorly understood. In this paper, we address this gap by proposing a parent selection…

Neural and Evolutionary Computing · Computer Science 2026-04-10 Andre Opris , Denis Antipov

We present a two-layer hidden Markov model to detect structure of haplotypes for unrelated individuals. This allows modeling two scales of linkage disequilibrium (one within a group of haplotypes and one between groups), thereby taking…

Quantitative Methods · Quantitative Biology 2013-04-09 Yongtao Guan

The management of natural environments, whether for conservation or production, requires a deep understanding of wildlife. The number, location, and behavior of wild animals are among the main subjects of study in ecology and wildlife…

Computer Vision and Pattern Recognition · Computer Science 2025-02-07 Federico Gonzalez , Leonel Viera , Rosina Soler , Lucila Chiarvetto Peralta , Matias Gel , Gimena Bustamante , Abril Montaldo , Brian Rigoni , Ignacio Perez

Catch-and-effort data are among the primary sources of information for assessing the status of terrestrial wildlife and fish. In fishery science, elaborate stock-assessment models are fitted to such data in order to estimate fish-population…

Populations and Evolution · Quantitative Biology 2022-11-10 Hirotaka Ijima , Carolina Minte-Vera , Yi-Jay Chang , Daisuke Ochi , Yuichi Tsuda , Marko Jusup

Recently, the RIDL-SIT technology has been field-tested for control of Aedes aegypti. The technique consists of releasing genetically modified mosquitoes carrying a "lethal gene". In 2016 the World Health Organisation (WHO) and the…

Populations and Evolution · Quantitative Biology 2020-06-02 Mario A. Natiello , Hernán G. Solari

No publicly available, ML ready datasets exist for wildlife health conditions in camera trap imagery, creating a fundamental barrier to automated health screening. We present a pipeline for generating synthetic training images depicting…

Computer Vision and Pattern Recognition · Computer Science 2026-03-31 David Brundage

We modified the Lotka-Volterra Equations with the assumption that two of the original four constant parameters in the traditional equations are time-dependent. In the first place, we assumed that the human population (borrowed from the…

Populations and Evolution · Quantitative Biology 2019-11-12 Cheng Sok Kin , Ian Man Ut , Lo Hang , U Ieng Hou , Ng Ka Weng , Un Soi Ha , Lei Ka Hin , Cheng Kun Heng , Tam Seak Tim , Chan Iong Kuai , Lee Wei Shan

Populations of widely distributed species often encounter and adapt to specific environmental conditions. However, comprehensive characterization of the genetic basis of adaptation is demanding, requiring genome-wide genotype data, multiple…

Populations and Evolution · Quantitative Biology 2013-08-01 Tanja Pyhäjärvi , Matthew B. Hufford , Sofiane Mezmouk , Jeffrey Ross-Ibarra

The search ability of an Evolutionary Algorithm (EA) depends on the variation among the individuals in the population. Maintaining an optimal level of diversity in the EA population is imperative to ensure that progress of the EA search is…

Neural and Evolutionary Computing · Computer Science 2014-11-18 Maumita Bhattacharya

Wildlife camera traps and crowd-sourced image material provide novel possibilities to monitor endangered animal species. However, massive image volumes that these methods produce are overwhelming for researchers to go through manually which…

Computer Vision and Pattern Recognition · Computer Science 2022-06-08 Ekaterina Nepovinnykh , Tuomas Eerola , Vincent Biard , Piia Mutka , Marja Niemi , Heikki Kälviäinen , Mervi Kunnasranta

Camera-traps is a relatively new but already popular instrument in the estimation of abundance of non-identifiable animals. Although camera-traps are convenient in application, there remain both theoretical complications such as spatial…

Quantitative Methods · Quantitative Biology 2017-03-23 Evgeny Ivanko