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A haplotype block, or simply a block, is a chromosomal segment, DNA base sequence or string that occurs in only a few variants or types in the genomes of a population of interest, and that has an encapsulated or 'private' frequency…

Populations and Evolution · Quantitative Biology 2024-06-21 Oliver Keatinge Clay

This paper tests for discrimination against immigrant defendants in the criminal justice system in Chile using a decade of nationwide administrative records on pretrial detentions. Observational benchmark regressions show that immigrant…

General Economics · Economics 2022-02-23 Patricio Domínguez , Nicolás Grau , Damián Vergara

This paper explores the application of machine learning to enhance our understanding of water accessibility issues in underserved communities called Colonias located along the northern part of the United States - Mexico border. We analyzed…

Animal Re-ID has recently gained substantial attention in the AI research community due to its high impact on biodiversity monitoring and unique research challenges arising from environmental factors. The subtle distinguishing patterns,…

Computer Vision and Pattern Recognition · Computer Science 2025-11-12 Depanshu Sani , Mehar Khurana , Saket Anand

Understanding population composition is essential across ecological, evolutionary, conservation, and resource management contexts. Modern methods such as genetic stock identification (GSI) estimate the proportion of individuals from each…

Methodology · Statistics 2025-10-02 Yiran Wang , Martin Lysy , Audrey Béliveau

Real-time wildlife detection in drone imagery supports critical ecological and conservation monitoring. However, standard detection models like YOLO often fail to generalize across locations and struggle with rare species, limiting their…

Biodiversity loss poses a significant threat to humanity, making wildlife monitoring essential for assessing ecosystem health. Avian species are ideal subjects for this due to their popularity and the ease of identifying them through their…

Machine Learning · Computer Science 2026-02-23 Nina Brolich , Simon Geis , Maximilian Kasper , Alexander Barnhill , Axel Plinge , Dominik Seuß

Parental origin effects play an important role in mammal development and disorder. Case-control mother-child pair genotype data can be used to detect parental origin effects and is often convenient to collect in practice. Most existing…

Methodology · Statistics 2022-08-11 Yuang Tian , Hong Zhang , Alexandre Bureau , Hagit Hochner , Jinbo Chen

It is desirable for detection and classification algorithms to generalize to unfamiliar environments, but suitable benchmarks for quantitatively studying this phenomenon are not yet available. We present a dataset designed to measure…

Computer Vision and Pattern Recognition · Computer Science 2019-12-13 Sara Beery , Grant van Horn , Pietro Perona

The search ability of an Evolutionary Algorithm (EA) depends on the variation among the individuals in the population [3, 4, 8]. Maintaining an optimal level of diversity in the EA population is imperative to ensure that progress of the EA…

Neural and Evolutionary Computing · Computer Science 2015-10-27 Maumita Bhattacharya

We develop a multi-state model to estimate the size of a closed population from ecological capture-recapture studies. We consider the case where capture-recapture data are not of a simple binary form, but where the state of an individual is…

Applications · Statistics 2017-08-02 Hannah Worthington , Rachel S. McCrea , Ruth King , Richard A. Griffiths

Evolutionary relationships among birds in Neoaves, the clade comprising the vast majority of avian diversity, have vexed systematists due to the ancient, rapid radiation of numerous lineages. We applied a new phylogenomic approach to…

We present two results about using allele-count (AC) burdens of rare SNPs discovered in a case-control sequencing study for prediction or validation in an external prospective study. When genotyping only the SNPs polymorphic in the sequence…

Applications · Statistics 2015-10-19 C. Ryan King , Paul J. Rathouz , Dan L. Nicolae

As generative AI tools are increasingly used to portray people in professional roles, understanding their racial and gender representational biases is critical. We audit over 1.5 million occupational personas generated by four major large…

Human-Computer Interaction · Computer Science 2026-03-30 Ilona van der Linden , Sahana Kumar , Arnav Dixit , Aadi Sudan , Smruthi Danda , David C. Anastasiu , Kai Lukoff

The third data release of Gaia has provided approximately 220 million low resolution spectra. Among these, about 100,000 correspond to white dwarfs. The magnitude of this quantity of data precludes the possibility of performing spectral…

Solar and Stellar Astrophysics · Physics 2023-11-29 Enrique Miguel García-Zamora , Santiago Torres , Alberto Rebassa-Mansergas

We study the effect of speciation, i.e. the introduction of new species through evolution into communities, in the setting of predator-prey systems. Predator-prey dynamics is classically well modeled by Lotka-Volterra equations, also when…

Populations and Evolution · Quantitative Biology 2025-03-20 Christian Hamster , Jorik Schaap , Peter van Heijster , Joshua Dijksman

Unsustainable trade in wildlife is one of the major threats affecting the global biodiversity crisis. An important part of the trade now occurs on the internet, especially on digital marketplaces and social media. Automated methods to…

Computer Vision and Pattern Recognition · Computer Science 2022-05-24 Ritwik Kulkarni , Enrico Di Minin

Wildlife re-identification aims to recognise individual animals by matching query images to a database of previously identified individuals, based on their fine-scale unique morphological characteristics. Current state-of-the-art models for…

Computer Vision and Pattern Recognition · Computer Science 2026-03-05 Thanos Polychronou , Lukáš Adam , Viktor Penchev , Kostas Papafitsoros

Migration policies in distributed evolutionary algorithms has not been an active research area until recently. However, in the same way as operators have an impact on performance, the choice of migrants is due to have an impact too. In this…

Neural and Evolutionary Computing · Computer Science 2008-06-18 Lourdes Araujo , Juan J. Merelo Guervos , Carlos Cotta , Francisco Fernandez de Vega

Collection of genotype data in case-control genetic association studies may often be incomplete for reasons related to genes themselves. This non-ignorable missingness structure, if not appropriately accounted for, can result in…

Methodology · Statistics 2024-07-12 Le Wang , Zhengbang Li , Ben Fitzpatrick , Clarice Weinberg , Jinbo Chen