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Related papers: Knowledge Guided Named Entity Recognition for BioM…

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Biomedical named entity recognition (NER) is a fundamental task in text mining of medical documents and has many applications. Deep learning based approaches to this task have been gaining increasing attention in recent years as their…

Computation and Language · Computer Science 2018-08-16 Devendra Singh Sachan , Pengtao Xie , Mrinmaya Sachan , Eric P Xing

The Scholarly Question Answering over Linked Data (Scholarly QALD) at The International Semantic Web Conference (ISWC) 2023 challenge presents two sub-tasks to tackle question answering (QA) over knowledge graphs (KGs). We answer the KGQA…

Artificial Intelligence · Computer Science 2023-10-20 Hanna Abi Akl

Named entity recognition (NER) is a fundamental part of extracting information from documents in biomedical applications. A notable advantage of NER is its consistency in extracting biomedical entities in a document context. Although…

Computation and Language · Computer Science 2022-10-25 Minbyul Jeong , Jaewoo Kang

In the third shared task of the Computational Approaches to Linguistic Code-Switching (CALCS) workshop, we focus on Named Entity Recognition (NER) on code-switched social-media data. We divide the shared task into two competitions based on…

Computation and Language · Computer Science 2019-06-11 Gustavo Aguilar , Fahad AlGhamdi , Victor Soto , Mona Diab , Julia Hirschberg , Thamar Solorio

Deep neural network models have recently achieved state-of-the-art performance gains in a variety of natural language processing (NLP) tasks (Young, Hazarika, Poria, & Cambria, 2017). However, these gains rely on the availability of large…

Computation and Language · Computer Science 2018-11-15 Maximilian Hofer , Andrey Kormilitzin , Paul Goldberg , Alejo Nevado-Holgado

Knowledge tagging for questions is vital in modern intelligent educational applications, including learning progress diagnosis, practice question recommendations, and course content organization. Traditionally, these annotations have been…

Computation and Language · Computer Science 2024-12-20 Hang Li , Tianlong Xu , Ethan Chang , Qingsong Wen

Knowledge graphs (KGs), as structured representations of real world facts, are intelligent databases incorporating human knowledge that can help machine imitate the way of human problem solving. However, KGs are usually huge and there are…

Machine Learning · Computer Science 2023-06-27 Haotian Li , Hongri Liu , Yao Wang , Guodong Xin , Yuliang Wei

The rapid expansion of medical literature presents growing challenges for structuring and integrating domain knowledge at scale. Knowledge Graphs (KGs) offer a promising solution by enabling efficient retrieval, automated reasoning, and…

Computation and Language · Computer Science 2025-08-20 Duzhen Zhang , Zixiao Wang , Zhong-Zhi Li , Yahan Yu , Shuncheng Jia , Jiahua Dong , Haotian Xu , Xing Wu , Yingying Zhang , Tielin Zhang , Jie Yang , Xiuying Chen , Le Song

Named Entity Recognition (NER) is a key step in the creation of structured data from digitised historical documents. Traditional NER approaches deal with flat named entities, whereas entities often are nested. For example, a postal address…

Information Retrieval · Computer Science 2023-02-22 Solenn Tual , Nathalie Abadie , J Chazalon , Bertrand Duménieu , Edwin Carlinet

Knowledge graph embedding (KGE) models represent each entity and relation of a knowledge graph (KG) with low-dimensional embedding vectors. These methods have recently been applied to KG link prediction and question answering over…

Computation and Language · Computer Science 2022-03-22 Apoorv Saxena , Adrian Kochsiek , Rainer Gemulla

In this paper, we present our system for the BioNNE English track, which aims to extract 8 types of biomedical nested named entities from biomedical text. We use a large language model (Mixtral 8x7B instruct) and ScispaCy NER model to…

Computation and Language · Computer Science 2024-07-09 Wenxin Zhou

Entity alignment (EA) aims to find entities in different knowledge graphs (KGs) that refer to the same object in the real world. Recent studies incorporate temporal information to augment the representations of KGs. The existing methods for…

Artificial Intelligence · Computer Science 2022-09-21 Li Cai , Xin Mao , Meirong Ma , Hao Yuan , Jianchao Zhu , Man Lan

We aimed to enhance the performance of a supervised model for clinical named-entity recognition (NER) using medical terminologies. In order to evaluate our system in French, we built a corpus for 5 types of clinical entities. We used a…

Computation and Language · Computer Science 2019-05-16 Ivan Lerner , Nicolas Paris , Xavier Tannier

Question answering (QA) has become a popular way for humans to access billion-scale knowledge bases. Unlike web search, QA over a knowledge base gives out accurate and concise results, provided that natural language questions can be…

Computation and Language · Computer Science 2019-03-07 Wanyun Cui , Yanghua Xiao , Haixun Wang , Yangqiu Song , Seung-won Hwang , Wei Wang

Supervised models trained to predict properties from representations have been achieving high accuracy on a variety of tasks. For instance, the BERT family seems to work exceptionally well on the downstream task from NER tagging to the…

Computation and Language · Computer Science 2020-12-22 Tejas Vaidhya , Ayush Kaushal

In this work, we explore the way to perform named entity recognition (NER) using only unlabeled data and named entity dictionaries. To this end, we formulate the task as a positive-unlabeled (PU) learning problem and accordingly propose a…

Computation and Language · Computer Science 2019-06-12 Minlong Peng , Xiaoyu Xing , Qi Zhang , Jinlan Fu , Xuanjing Huang

Answer selection, which is involved in many natural language processing applications such as dialog systems and question answering (QA), is an important yet challenging task in practice, since conventional methods typically suffer from the…

Computation and Language · Computer Science 2021-04-13 Yang Deng , Yuexiang Xie , Yaliang Li , Min Yang , Wai Lam , Ying Shen

In biomedical literature, it is common for entity boundaries to not align with word boundaries. Therefore, effective identification of entity spans requires approaches capable of considering tokens that are smaller than words. We introduce…

Computation and Language · Computer Science 2018-09-25 Emily Sheng , Prem Natarajan

Named entity recognition has been extensively studied on English news texts. However, the transfer to other domains and languages is still a challenging problem. In this paper, we describe the system with which we participated in the first…

Computation and Language · Computer Science 2020-07-03 Lukas Lange , Heike Adel , Jannik Strötgen

Named entity recognition (NER) systems that perform well require task-related and manually annotated datasets. However, they are expensive to develop, and are thus limited in size. As there already exists a large number of NER datasets that…

Computation and Language · Computer Science 2019-04-23 Nargiza Nosirova , Mingbin Xu , Hui Jiang
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