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Motivation: Biomedical named-entity normalization involves connecting biomedical entities with distinct database identifiers in order to facilitate data integration across various fields of biology. Existing systems for biomedical named…

Computation and Language · Computer Science 2023-10-24 Zainab Awan , Tim Kahlke , Peter Ralph , Paul Kennedy

A large amount of information in today's world is now stored in knowledge bases. Named Entity Recognition (NER) is a process of extracting, disambiguation, and linking an entity from raw text to insightful and structured knowledge bases.…

Computation and Language · Computer Science 2024-11-11 Monica Munnangi

Named entity recognition (NER) is one of the tasks in natural language processing that can greatly benefit from the use of external knowledge sources. We propose a named entity recognition framework composed of knowledge-based feature…

Computation and Language · Computer Science 2019-06-07 Sławomir Dadas

Named entity recognition (NER) is highly sensitive to sentential syntactic and semantic properties where entities may be extracted according to how they are used and placed in the running text. To model such properties, one could rely on…

Computation and Language · Computer Science 2020-10-30 Yuyang Nie , Yuanhe Tian , Yan Song , Xiang Ao , Xiang Wan

Named entity recognition (NER) is a natural language processing task (NLP), which aims to identify named entities and classify them like person, location, organization, etc. In the Arabic language, we can find a considerable size of…

Computation and Language · Computer Science 2023-04-10 Alaa Shaker , Alaa Aldarf , Igor Bessmertny

This work investigates multiple approaches to Named Entity Recognition (NER) for text in Electronic Health Record (EHR) data. In particular, we look into the application of (i) rule-based, (ii) deep learning and (iii) transfer learning…

In this paper we examine the benefit of performing named entity recognition (NER) and co-reference resolution to an English and a Greek corpus used for text segmentation. The aim here is to examine whether the combination of text…

Computation and Language · Computer Science 2016-10-31 Pavlina Fragkou

This study addresses the challenge of ambiguity in knowledge graph question answering (KGQA). While recent KGQA systems have made significant progress, particularly with the integration of large language models (LLMs), they typically assume…

Computation and Language · Computer Science 2025-04-15 Liqiang Wen , Guanming Xiong , Tong Mo , Bing Li , Weiping Li , Wen Zhao

The aim of Named Entity Recognition (NER) is to identify references of named entities in unstructured documents, and to classify them into pre-defined semantic categories. NER often aids from added background knowledge in the form of…

Computation and Language · Computer Science 2015-11-24 S. Thenmalar , J. Balaji , T. V. Geetha

Named entity disambiguation (NED), which involves mapping textual mentions to structured entities, is particularly challenging in the medical domain due to the presence of rare entities. Existing approaches are limited by the presence of…

Computation and Language · Computer Science 2021-10-18 Maya Varma , Laurel Orr , Sen Wu , Megan Leszczynski , Xiao Ling , Christopher Ré

Named Entity Recognition for social media data is challenging because of its inherent noisiness. In addition to improper grammatical structures, it contains spelling inconsistencies and numerous informal abbreviations. We propose a novel…

Computation and Language · Computer Science 2019-06-11 Gustavo Aguilar , Suraj Maharjan , Adrian Pastor López-Monroy , Thamar Solorio

Knowledge Graph Question Answering (KGQA) is a crucial task in natural language processing that requires reasoning over knowledge graphs (KGs) to answer natural language questions. Recent methods utilizing large language models (LLMs) have…

Computation and Language · Computer Science 2025-06-12 Xiujun Zhou , Pingjian Zhang , Deyou Tang

Large Language Models (LLMs) provide flexible natural language processing capabilities, while knowledge graphs (KGs) offer explicit and structured knowledge. Integrating these two in a complementary manner enables the development of…

Computation and Language · Computer Science 2026-05-12 Shusaku Egami , Aoi Ohta , Tomoki Tsujimura , Masaki Asada , Tatsuya Ishigaki , Ken Fukuda , Masahiro Hamasaki , Hiroya Takamura

Previous works on knowledge-to-text generation take as input a few RDF triples or key-value pairs conveying the knowledge of some entities to generate a natural language description. Existing datasets, such as WIKIBIO, WebNLG, and E2E,…

Computation and Language · Computer Science 2020-10-27 Liying Cheng , Dekun Wu , Lidong Bing , Yan Zhang , Zhanming Jie , Wei Lu , Luo Si

Entity alignment is to find identical entities in different knowledge graphs (KGs) that refer to the same real-world object. Embedding-based entity alignment techniques have been drawing a lot of attention recently because they can help…

Computation and Language · Computer Science 2022-11-08 Xiaobin Tian , Zequn Sun , Guangyao Li , Wei Hu

Unlike widely used Named Entity Recognition (NER) data sets in generic domains, biomedical NER data sets often contain mentions consisting of discontinuous spans. Conventional sequence tagging techniques encode Markov assumptions that are…

Computation and Language · Computer Science 2020-04-29 Xiang Dai , Sarvnaz Karimi , Ben Hachey , Cecile Paris

Named Entity Disambiaguation (NED) is a central task for applications dealing with natural language text. Assume that we have a graph based knowledge base (subsequently referred as Knowledge Graph) where nodes represent various real world…

Computation and Language · Computer Science 2014-07-15 Sutanay Choudhury , Chase Dowling

Multilingual knowledge graph (KG) embeddings provide latent semantic representations of entities and structured knowledge with cross-lingual inferences, which benefit various knowledge-driven cross-lingual NLP tasks. However, precisely…

Artificial Intelligence · Computer Science 2018-06-19 Muhao Chen , Yingtao Tian , Kai-Wei Chang , Steven Skiena , Carlo Zaniolo

Lately, instruction-based techniques have made significant strides in improving performance in few-shot learning scenarios. They achieve this by bridging the gap between pre-trained language models and fine-tuning for specific downstream…

Information Retrieval · Computer Science 2024-01-25 Hiranmai Sri Adibhatla , Pavan Baswani , Manish Shrivastava

Biomedical datasets are often modeled as knowledge graphs (KGs) because they capture the multi-relational, heterogeneous, and dynamic natures of biomedical systems. KG completion (KGC), can, therefore, help researchers make predictions to…

Artificial Intelligence · Computer Science 2023-07-18 Lauren Nicole DeLong , Ramon Fernández Mir , Zonglin Ji , Fiona Niamh Coulter Smith , Jacques D. Fleuriot