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Related papers: Comparison of unfolding methods using RooFitUnfold

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We study theoretical limits of \emph{descending} phase retrieval algorithms. Utilizing \emph{Random duality theory} (RDT) we develop a generic program that allows statistical characterization of various algorithmic performance metrics.…

Machine Learning · Statistics 2025-06-24 Mihailo Stojnic

We extend Robust Optimization to fractional programming, where both the objective and the constraints contain uncertain parameters. Earlier work did not consider uncertainty in both the objective and the constraints, or did not use Robust…

Optimization and Control · Mathematics 2015-08-21 Bram L. Gorissen

We review the background, theory and general equations for the analysis of equilibrium protein unfolding experiments, focusing on denaturant and heat-induced unfolding. The primary focus is on the thermodynamics of reversible…

Biological Physics · Physics 2020-12-23 Kresten Lindorff-Larsen , Kaare Teilum

This article presents a multi-physics methodology for the numerical simulation of physical systems that involve the non-linear interaction of multi-phase reactive fluids and elastoplastic solids, inducing high strain-rates and high…

Computational Physics · Physics 2021-06-04 Tim Wallis , Philip T. Barton , Nikolaos Nikiforakis

Revealing the functional sites of biological sequences, such as evolutionary conserved, structurally interacting or co-evolving protein sites, is a fundamental, and yet challenging task. Different frameworks and models were developed to…

Quantitative Methods · Quantitative Biology 2019-06-07 Justas Dauparas , Haobo Wang , Avi Swartz , Peter Koo , Mor Nitzan , Sergey Ovchinnikov

We introduce a novel co-learning paradigm for manifolds naturally equipped with a group action, motivated by recent developments on learning a manifold from attached fibre bundle structures. We utilize a representation theoretic mechanism…

Machine Learning · Computer Science 2019-12-10 Yifeng Fan , Tingran Gao , Zhizhen Zhao

In this article, we propose a data-driven methodology for combining the solutions of a set of competing turbulence models. The individual model predictions are linearly combined for providing an ensemble solution accompanied by estimates of…

Fluid Dynamics · Physics 2023-01-24 Maximilien de Zordo-Banliat , Grégory Dergham , Xavier Merle , Paola Cinnella

An hybrid iterative Tykhonov regularization approach with an accelerating algorithm is considered. This method is illustrated by two neutron spectrum unfoldings measured with a Bonner Sphere system.

Nuclear Experiment · Physics 2007-05-23 Olivier Besida

In comparing the behavior of an energy spectrum to the predictions of random matrix theory one must transform the spectrum such that the averaged level spacing is constant, a procedure known as unfolding. Once energy spectrums belong to an…

Disordered Systems and Neural Networks · Physics 2023-06-14 Richard Berkovits

This paper aims to investigate the distributed stochastic optimization problems on compact embedded submanifolds (in the Euclidean space) for multi-agent network systems. To address the manifold structure, we propose a distributed…

Optimization and Control · Mathematics 2025-10-28 Jishu Zhao , Xi Wang , Jinlong Lei , Shixiang Chen

Software debloating tools seek to improve program security and performance by removing unnecessary code, called bloat. While many techniques have been proposed, several barriers to their adoption have emerged. Namely, debloating tools are…

Software Engineering · Computer Science 2024-06-14 Michael D. Brown , Adam Meily , Brian Fairservice , Akshay Sood , Jonathan Dorn , Eric Kilmer , Ronald Eytchison

In this paper we propose a new method to detect and classify coexisting solutions in nonlinear systems. We focus on mechanical and structural systems where we usually avoid multistability for safety and reliability. We want to be sure that…

Adaptation and Self-Organizing Systems · Physics 2016-02-12 P. Brzeski , M. Lazarek , T. Kapitaniak , J. Kurths , P. Perlikowski

The pooling problem has applications, e.g., in petrochemical refining, water networks, and supply chains and is widely studied in global optimization. To date, it has largely been treated deterministically, neglecting the influence of…

Optimization and Control · Mathematics 2019-06-19 Johannes Wiebe , Inês Cecílio , Ruth Misener

A very simple heuristic approach to the unfolding problem will be described. An iterative algorithm starts with an empty histogram and every iteration aims to add one entry to this histogram. The entry to be added is selected according to a…

Data Analysis, Statistics and Probability · Physics 2014-11-06 Yordan Karadzhov

We study a unified approach and algorithm for constructive discrepancy minimization based on a stochastic process. By varying the parameters of the process, one can recover various state-of-the-art results. We demonstrate the flexibility of…

Data Structures and Algorithms · Computer Science 2022-05-03 Nikhil Bansal , Aditi Laddha , Santosh S. Vempala

Proteins created by combinatorial methods in vitro are an important source of information for understanding sequence-structure-function relationships. Alignments of folded proteins from combinatorial libraries can be analyzed using methods…

Biomolecules · Quantitative Biology 2007-05-23 Jeffrey B. Endelman , Jesse D. Bloom , Christopher R. Otey , Marco Landwehr , Frances H. Arnold

The use of multivariate classifiers, especially neural networks and decision trees, has become commonplace in particle physics. Typically, a series of classifiers is trained rather than just one to enhance the performance; this is known as…

Nuclear Experiment · Physics 2015-06-16 Justin Stevens , Mike Williams

It is often of interest to infer lower-dimensional structure underlying complex data. As a flexible class of non-linear structures, it is common to focus on Riemannian manifolds. Most existing manifold learning algorithms replace the…

Machine Learning · Statistics 2026-01-27 David B Dunson , Nan Wu

Learning to manipulate cloth is both a paradigmatic problem for robotic research and a problem of immediate relevance to a variety of applications ranging from assistive care to the service industry. The complex physics of the deformable…

Robotics · Computer Science 2026-02-19 Jack Rome , Stephen James , Subramanian Ramamoorthy

We review recent results regarding the problem of the stability of Sobolev inequalities on Riemannian manifolds with Ricci curvature lower bounds. We shall describe techniques and methods from smooth and non-smooth geometry, the fruitful…

Analysis of PDEs · Mathematics 2025-07-10 Francesco Nobili
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