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For a finite group $G$, let $B$ be an equivalence (equality, conjugacy or order) relation on $G$ and let $A$ be a (power, enhanced power or commuting) graph with vertex set $G$. The $B$ super $A$ graph is a simple graph with vertex set $G$…

Group Theory · Mathematics 2022-10-27 Sandeep Dalal , Sanjay Mukherjee , Kamal Lochan Patra

We propose an algorithm for determining the zeros of the electric conductivity in large molecular nanonstructures such as graphene sheets. To this end, we employ the inverse graph method, whereby non-zeros of the Green's functions are…

Mesoscale and Nanoscale Physics · Physics 2025-05-21 Marian Nita , Mugurel Tolea , Catalina Marinescu

Many disciplines of science and engineering deal with problems related to compositions, ranging from chemical compositions in materials science to portfolio compositions in economics. They exist in non-Euclidean simplex spaces, causing many…

Materials Science · Physics 2024-11-06 Adam M. Krajewski , Allison M. Beese , Wesley F. Reinhart , Zi-Kui Liu

A self-contained graph is an infinite graph which is isomorphic to one of its proper induced subgraphs. In this paper, these graphs are studied by presenting some examples and defining some of their sub-structures such as removable…

Combinatorics · Mathematics 2016-11-04 Mohammad Hadi Shekarriz , Madjid Mirzavaziri

A non-commuting graph of a finite group $G$ is a graph whose vertices are non-central elements of $G$ and two vertices are adjacent if they don't commute in $G$. In this paper, we study the non-commuting graph of the group $U_{6n}$ and…

Combinatorics · Mathematics 2020-10-27 Sanhan Khasraw , C. H. Jaf , Nor Haniza Sarmin , Ibrahim Gambo

In this paper, we will give a structure theory for signed graphs with fixed smallest eigenvalue and investigate signed graphs with smallest eigenvalue greater than $-1-\sqrt{2}$. Given a real number $\lambda\leq -1$, we show that the…

Combinatorics · Mathematics 2026-02-25 Jack H. Koolen , Jing-Yuan Liu , Qianqian Yang , Meng-Yue Cao

Recently, deep generative models have revealed itself as a promising way of performing de novo molecule design. However, previous research has focused mainly on generating SMILES strings instead of molecular graphs. Although current graph…

Quantitative Methods · Quantitative Biology 2018-04-24 Yibo Li , Liangren Zhang , Zhenming Liu

Chordal graphs are the graphs in which every cycle of length at least four has a chord. A set $S$ is a vertex separator for vertices $a$ and $b$ if the removal of $S$ of the graph separates $a$ and $b$ into distinct connected components. A…

Discrete Mathematics · Computer Science 2018-03-22 Sérgio H. Nogueira , Vinicius F. dos Santos

A popular method of force-directed graph drawing is multidimensional scaling using graph-theoretic distances as input. We present an algorithm to minimize its energy function, known as stress, by using stochastic gradient descent (SGD) to…

Computational Geometry · Computer Science 2018-06-29 Jonathan X. Zheng , Samraat Pawar , Dan F. M. Goodman

A {\em $(d,h)$-decomposition} of a graph $G$ is an order pair $(D,H)$ such that $H$ is a subgraph of $G$ where $H$ has the maximum degree at most $h$ and $D$ is an acyclic orientation of $G-E(H)$ of maximum out-degree at most $d$. A graph…

Combinatorics · Mathematics 2022-04-19 Lin Niu , Xiangwen Li

Understanding the structure of a graph along with the structure of its subgraphs is important for several problems in graph theory. Two examples are the Reconstruction Conjecture and isomorph-free generation. This paper raises the question…

Combinatorics · Mathematics 2009-09-18 Stephen G. Hartke , Hannah Kolb , Jared Nishikawa , Derrick Stolee

The distance matrix of a connected graph is the symmetric matrix with columns and rows indexed by the vertices and entries that are the pairwise distances between the corresponding vertices. We give a construction for graphs which differ in…

Combinatorics · Mathematics 2016-06-23 Kristin Heysse

A nut graph is a nontrivial simple graph whose adjacency matrix has a simple eigenvalue zero such that the corresponding eigenvector has no zero entries. It is known that the order $n$ and degree $d$ of a vertex-transitive nut graph satisfy…

Combinatorics · Mathematics 2026-01-14 Ivan Damnjanović

A split graph is a graph whose vertex set can be partitioned into a clique and a stable set. Given a graph $G$ and weight function $w: V(G) \to \mathbb{Q}_{\geq 0}$, the Split Vertex Deletion (SVD) problem asks to find a minimum weight set…

Combinatorics · Mathematics 2020-09-24 Matthew Drescher , Samuel Fiorini , Tony Huynh

In this article, we introduce a new graph theoretic structure associated with a finite commutative ring, called nil clean divisor graph. For a ring $R$, nil clean divisor graph is denoted by $G_N(R)$, where the vertex set is $\{x\in R\,:\,…

Rings and Algebras · Mathematics 2019-03-07 Ajay Sharma , Dhiren Kumar Basnet

We propose a hierarchical normalizing flow model for generating molecular graphs. The model produces new molecular structures from a single-node graph by recursively splitting every node into two. All operations are invertible and can be…

Chemical Physics · Physics 2021-06-11 Maksim Kuznetsov , Daniil Polykovskiy

Recent studies show that graph processing systems on a single machine can achieve competitive performance compared with cluster-based graph processing systems. In this paper, we present NXgraph, an efficient graph processing system on a…

Databases · Computer Science 2020-08-10 Yuze Chi , Guohao Dai , Yu Wang , Guangyu Sun , Guoliang Li , Huazhong Yang

The processes of constructing some graphs from others using binary operations of union with intersection (gluing) are studied. For graph classes closed with respect to gluing operations the elemental and operational bases are introduced.…

Combinatorics · Mathematics 2020-11-24 M. A. Iordanski

Let $G=\Gamma(S)$ be a semigroup graph, i.e., a zero-divisor graph of a semigroup $S$ with zero element 0. For any adjacent vertices $x, y$ in $G$, denote $C(x,y)={z\in V(G) | N(z)={x,y}}$. Assume that in $G$ there exist two adjacent…

Rings and Algebras · Mathematics 2018-04-24 Li Chen , Tongsuo Wu

A graph $G$ is called self-ordered (a.k.a asymmetric) if the identity permutation is its only automorphism. Equivalently, there is a unique isomorphism from $G$ to any graph that is isomorphic to $G$. We say that $G=(V,E)$ is robustly…

Computational Complexity · Computer Science 2023-06-22 Oded Goldreich , Avi Wigderson
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