Related papers: A Novel Method to Construct NSSD Molecular Graphs

We consider the problem of constructing deletion correcting codes over a binary alphabet and take a graph theoretic view. An $n$-bit $s$-deletion correcting code is an independent set in a particular graph. We propose constructing such a…

We propose a combination of a variational autoencoder and a transformer based model which fully utilises graph convolutional and graph pooling layers to operate directly on graphs. The transformer model implements a novel node encoding…

Designing molecules with desirable physiochemical properties and functionalities is a long-standing challenge in chemistry, material science, and drug discovery. Recently, machine learning-based generative models have emerged as promising…

Two graphs $G$ and $H$ are \emph{cospectral} if the adjacency matrices share the same spectrum. Constructing cospectral non-isomorphic graphs has been studied extensively for many years and various constructions are known in the literature,…

We present a matrix version of a known method of constructing common eigenvectors of two diagonalizable commuting matrices, thus enabling their simultaneous diagonalization. The matrices may have simple eigenvalues of multiplicity greater…

Given vertex valencies admissible for a self-dual polyhedral graph, we describe an algorithm to explicitly construct such a polyhedron. Inputting in the algorithm permutations of the degree sequence can give rise to non-isomorphic graphs.…

S-prime graphs are graphs that cannot be represented as nontrivial subgraphs of nontrivial Cartesian products of graphs, i.e., whenever it is a subgraph of a nontrivial Cartesian product graph it is a subgraph of one the factors. A graph is…

Score-based graph generative models (SGGMs) have proven effective in critical applications such as drug discovery and protein synthesis. However, their theoretical behavior, particularly regarding convergence, remains underexplored. Unlike…

Let $G$ be a finite insoluble group with soluble radical $ R(G)$. The solubility graph $\Gamma_{\rm S}(G)$ of $G$ is a simple graph whose vertices are the elements of $G\setminus R(G) $ and two distinct vertices $x$ and $y$ are adjacent if…

A subset $S$ of $\{0,1,...,2t-1\}^n$ is called a $t$-fold MDS code if every line in each of $n$ base directions contains exactly $t$ elements of $S$. The adjacency graph of a $t$-fold MDS code is not connected if and only if the…

In the last two decades new techniques emerged to construct valuations on an infinite division ring $D,$ given a normal subgroup $N\subseteq D$ of finite index. These techniques were based on the commuting graph of $D^{\times}/N$ in the…

The singular value decomposition (SVD) allows to write a matrix as a product of a left singular vectors matrix, a nonnegative singular values diagonal matrix and a right singular vectors matrix. Among the applications of the SVD are the…

A graph is $H$-free if it does not contain $H$ as a subgraph. The diamond graph is the graph obtained from $K_4$ by deleting one edge. We prove that if $G$ is a connected graph with order $n\geq 10$, then there exists a subset $S\subseteq…

Representing a graph as a vector is a challenging task; ideally, the representation should be easily computable and conducive to efficient comparisons among graphs, tailored to the particular data and analytical task at hand. Unfortunately,…

Generating novel molecules with optimal properties is a crucial step in many industries such as drug discovery. Recently, deep generative models have shown a promising way of performing de-novo molecular design. Although graph generative…

The $n$-cube graph is the graph on the vertex set of $n$-tuples of $0$s and $1$s, with two vertices joined by an edge if and only if the $n$-tuples differ in exactly one component. We compute the Smith group of this graph, or, equivalently,…

Let $G$ be a finite group. The \textit{commuting/nilpotent/solvable conjugacy class graph} ($\Gamma_{CCC}(G)$, $\Gamma_{NCC}(G)$, or $\Gamma_{SCC}(G)$) is a simple graph whose vertex set consists of all non-central conjugacy classes of $G$.…

The symplectic graph Sp(2d, q) is the collinearity graph of the symplectic space of dimension 2d over a finite field of order q. A k-regular graph on v vertices is a divisible design graph with parameters (v, k, lambda_1, lambda_2 ,m,n) if…

Let $G$ be $2$-generated group. The generating graph of $\Gamma(G)$ is the graph whose vertices are the elements of $G$ and where two vertices $g$ and $h$ are adjacent if $G=\langle g,h\rangle$. This graph encodes the combinatorial…

Searching new molecules in areas like drug discovery often starts from the core structures of candidate molecules to optimize the properties of interest. The way as such has called for a strategy of designing molecules retaining a…