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A feature of the brains of intelligent animals is the ability to learn to respond to an ensemble of active neuronal inputs with a behaviorally appropriate ensemble of active neuronal outputs. Previously, a hypothesis was proposed on how…

Neurons and Cognition · Quantitative Biology 2025-02-04 Marat M. Rvachev

In recent years there has been a growing interest in the role of networks and clusters in the global economy. Despite being a popular research topic in economics, sociology and urban studies, geographical clustering of human activity has…

Physics and Society · Physics 2015-05-19 Roberto Catini , Dmytro Karamshuk , Orion Penner , Massimo Riccaboni

Community detection techniques are widely used to infer hidden structures within interconnected systems. Despite demonstrating high accuracy on benchmarks, they reproduce the external classification for many real-world systems with a…

Digital Libraries · Computer Science 2016-08-25 Vasyl Palchykov , Valerio Gemmetto , Alexey Boyarsky , Diego Garlaschelli

Identifying concentrations of components from an observed mixture is a fundamental problem in signal processing. It has diverse applications in fields ranging from hyperspectral imaging to denoising biomedical sensors. This paper focuses on…

Computational Engineering, Finance, and Science · Computer Science 2016-11-17 Shahin Mohammadi , Neta Zuckerman , Andrea Goldsmith , Ananth Grama

Distinguishing one person from another (what biometricians call recognition) is extremely relevant for different aspects of life. Traditional biometric modalities (fingerprint, face, iris, voice) rely on unique, stable features that…

Quantitative Methods · Quantitative Biology 2025-06-09 Matteo Fraschini , Matteo Demuru , Daniele Marinazzo , Luca Didaci

Transcriptomic data is a treasure-trove in modern molecular biology, as it offers a comprehensive viewpoint into the intricate nuances of gene expression dynamics underlying biological systems. This genetic information must be utilised to…

Molecular Networks · Quantitative Biology 2023-12-13 Vikram Singh , Vikram Singh

Cortical minicolumns are considered a model of cortical organization. Their function is still a source of research and not reflected properly in modern architecture of nets in algorithms of Artificial Intelligence. We assume its function…

Computer Vision and Pattern Recognition · Computer Science 2017-12-19 Vasily Morzhakov , Alexey Redozubov

We propose a model for description of activity-dependent evolution and self-wiring between binary neurons. Specifically, this model can be used for investigation of growth of neuronal connectivity in the developing neocortex. By using…

Neurons and Cognition · Quantitative Biology 2007-05-23 Fail M. Gafarov

The presence of synchronized clusters in neuron networks is a hallmark of information transmission and processing. The methods commonly used to study cluster synchronization in networks of coupled oscillators ground on simplifying…

Dynamical Systems · Mathematics 2020-07-09 Matteo Lodi , Fabio Della Rossa , Francesco Sorrentino , Marco Storace

Detecting and evaluating regions of brain under various circumstances is one of the most interesting topics in computational neuroscience. However, the majority of the studies on detecting communities of a functional connectivity network of…

Social and Information Networks · Computer Science 2018-06-04 Keivan Hassani Monfared , Kris Vasudevan , Jordan S. Farrell , G. Campbell Teskey

Neurons can display highly variable dynamics. While such variability presumably supports the wide range of behaviors generated by the organism, their gene expressions are relatively stable in the adult brain. This suggests that neuronal…

Neurons and Cognition · Quantitative Biology 2023-11-07 Lu Mi , Trung Le , Tianxing He , Eli Shlizerman , Uygar Sümbül

A big challenge in current biology is to understand the exact self-organization mechanism underlying complex multi-physics coupling developmental processes. With multiscale computations of from subcellular gene expressions to cell…

Cell Behavior · Quantitative Biology 2021-05-18 Xiaoliang Wang , Dongyun Bai

Neural systems show a modular and typically also a hierarchical organisation across different levels and across different species. Topology relates to function, but it is also influences dynamics as earlier studies showed its effect on…

Neurons and Cognition · Quantitative Biology 2014-05-15 Marcus Kaiser

Visually comparing brain networks, or connectomes, is an essential task in the field of neuroscience. Especially relevant to the field of clinical neuroscience, group studies that examine differences between populations or changes over time…

Neurons and Cognition · Quantitative Biology 2017-07-03 Johnson J. G. Keiriz , Liang Zhan , Morris Chukhman , Olu Ajilore , Alex D. Leow , Angus G. Forbes

Much of the information the brain processes and stores is temporal in nature - a spoken word or a handwritten signature, for example, is defined by how it unfolds in time. However, it remains unclear how neural circuits encode complex…

Neurons and Cognition · Quantitative Biology 2017-08-15 Vishwa Goudar , Dean Buonomano

Classification and clustering have been studied separately in machine learning and computer vision. Inspired by the recent success of deep learning models in solving various vision problems (e.g., object recognition, semantic segmentation)…

Machine Learning · Computer Science 2017-12-13 Ali Borji , Aysegul Dundar

Neural systems can be modeled as networks of functionally connected neural elements. The resulting network can be analyzed using mathematical tools from network science and graph theory to quantify the system's topological organization and…

Neurons and Cognition · Quantitative Biology 2020-07-01 Richard F. Betzel , Katherine C. Wood , Christopher Angeloni , Maria Neimark Geffen , Danielle S. Bassett

The typical cell is a key concept for stochastic-geometry based modeling in communication networks, as it provides a rigorous framework for describing properties of a serving zone associated with a component selected at random in a large…

Networking and Internet Architecture · Computer Science 2018-11-26 Alexander Hinsen , Christian Hirsch , Benedikt Jahnel , Elie Cali

We present a novel and hierarchical approach for supervised classification of signals spanning over a fixed graph, reflecting shared properties of the dataset. To this end, we introduce a Convolutional Cluster Pooling layer exploiting a…

Machine Learning · Computer Science 2019-02-14 Angelo Porrello , Davide Abati , Simone Calderara , Rita Cucchiara

Quian Quiroga et al. [Nature 435, 1102 (2005)] have recently discovered neurons that appear to have the characteristics of grandmother (GM) cells. Here we quantitatively assess the compatibility of their data with the GM-cell hypothesis. We…

Neurons and Cognition · Quantitative Biology 2007-05-23 John Collins , Dezhe Z. Jin