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Following the recent successful examples of large technology companies, many modern enterprises seek to build knowledge graphs to provide a unified view of corporate knowledge and to draw deep insights using machine learning and logical…

Machine learning has been successfully used in critical domains, such as medicine. However, extracting meaningful insights from biomedical data is often constrained by the lack of their available disease labels. In this research, we…

Quantitative Methods · Quantitative Biology 2025-04-02 Hido Pinto , Eran Segal

Machine learning on graph-structured data has recently become a major topic in industry and research, finding many exciting applications such as recommender systems and automated theorem proving. We propose an energy-based graph embedding…

Machine Learning · Computer Science 2023-08-25 Dominik Dold , Josep Soler Garrido

A core task in process mining is process discovery which aims to learn an accurate process model from event log data. In this paper, we propose to use (block-) structured programs directly as target process models so as to establish…

Artificial Intelligence · Computer Science 2020-08-14 Dell Zhang , Alexander Kuhnle , Julian Richardson , Murat Sensoy

Large code models (LCMs) have remarkably advanced the field of code generation. Despite their impressive capabilities, they still face practical deployment issues, such as high inference costs, limited accessibility of proprietary LCMs, and…

Software Engineering · Computer Science 2025-05-21 Yujia Chen , Yang Ye , Zhongqi Li , Yuchi Ma , Cuiyun Gao

The use of Air traffic management (ATM) simulators for planing and operations can be challenging due to their modelling complexity. This paper presents XALM (eXplainable Active Learning Metamodel), a three-step framework integrating active…

In silico tools are important for generating novel hypotheses and exploring alternatives in de novo metabolic pathway design. However, while many computational frameworks have been proposed for retrobiosynthesis, few successful examples of…

Machine Learning · Computer Science 2026-04-16 Peter Zhiping Zhang , Jeffrey D. Varner

Quantum-accurate computer simulations play a central role in understanding phase-change materials (PCMs) for advanced memory technologies. However, direct quantum-mechanical simulations are necessarily limited to simplified models,…

Materials Science · Physics 2022-09-20 Yuxing Zhou , Wei Zhang , En Ma , Volker L. Deringer

Considering the advances in building monitoring and control through networks of interconnected devices, effective handling of the associated rich data streams is becoming an important challenge. In many situations the application of…

Computers and Society · Computer Science 2019-01-21 Grigore Stamatescu , Iulia Stamatescu , Nicoleta Arghira , Ioana Fagarasan

In this technical report, we present the Educational Data Mining Automated Research System (EDM-ARS), a domain-specific multi-agent pipeline that automates end-to-end educational data mining (EDM) research. We conceptualize EDM-ARS as a…

Artificial Intelligence · Computer Science 2026-03-20 Chenguang Pan , Zhou Zhang , Weixuan Xiao , Chengyuan Yao

Over the past years, there has been a resurgence of Datalog-based systems in the database community as well as in industry. In this context, it has been recognized that to handle the complex knowl\-edge-based scenarios encountered today,…

Databases · Computer Science 2018-07-24 Luigi Bellomarini , Georg Gottlob , Emanuel Sallinger

Model-driven engineering is the automatic production of software artefacts from abstract models of structure and functionality. By targeting a specific class of system, it is possible to automate aspects of the development process, using…

Software Engineering · Computer Science 2013-01-03 Chen-Wei Wang , Jim Davies

With the accumulation of data at an unprecedented rate, its potential to fuel scientific discovery is growing exponentially. This position paper urges the Machine Learning (ML) community to exploit the capabilities of large generative…

Computation and Language · Computer Science 2024-02-22 Bodhisattwa Prasad Majumder , Harshit Surana , Dhruv Agarwal , Sanchaita Hazra , Ashish Sabharwal , Peter Clark

Diabetes is a worldwide health issue affecting millions of people. Machine learning methods have shown promising results in improving diabetes prediction, particularly through the analysis of diverse data types, namely gene expression data.…

Machine Learning · Computer Science 2024-04-24 Rita T. Sousa , Heiko Paulheim

Process mining, i.e., a sub-field of data science focusing on the analysis of event data generated during the execution of (business) processes, has seen a tremendous change over the past two decades. Starting off in the early 2000's, with…

Software Engineering · Computer Science 2019-05-16 Alessandro Berti , Sebastiaan J. van Zelst , Wil van der Aalst

Big data analytics (BDA) applications use machine learning algorithms to extract valuable insights from large, fast, and heterogeneous data sources. New software engineering challenges for BDA applications include ensuring performance…

Software Engineering · Computer Science 2020-11-18 Camilo Castellanos , Carlos A. Varela , Dario Correal

Thousands of metabolomic papers are published each year, creating challenges for scientists to combine results and yield conclusions that span across studies. Literature databases such as the Human Metabolome Database provide summaries of…

Quantitative Methods · Quantitative Biology 2024-10-24 Delilah Milner , Oliver Fiehn

Addressing the functionality of genomes is one of the most important and challenging tasks of today's biology. In particular the ability to link genotypes to corresponding phenotypes is of interest in the reconstruction and biotechnological…

Machine learning (ML) is increasingly becoming a common tool in computational chemistry. At the same time, the rapid development of ML methods requires a flexible software framework for designing custom workflows. MLatom 3 is a program…

Computing-in-Memory (CIM) macros have gained popularity for deep learning acceleration due to their highly parallel computation and low power consumption. However, limited macro size and ADC precision introduce throughput and accuracy…

Hardware Architecture · Computer Science 2026-05-01 Ming-Han Lin , Tian-Sheuan Chang