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The growing integration of artificial intelligence (AI) and machine learning (ML) in medical systems requires effective measures to address emerging security risks. One such risk is that of adversaries introducing false data through…

The BioModels database is one of the premier databases for computational models in systems biology. The database contains over 1000 curated models and an even larger number of non-curated models. All the models are stored in the…

Molecular Networks · Quantitative Biology 2026-02-02 Bhavyahshree Navaneetha Krishnan , Adel Heydarabadipour , Herbert Sauro

Component-Based Development (CBD) is a popular approach to mitigating the costs of creating software systems. However, it is not clear to what extent the core component selection and adaptation activities of CBD can be implemented to…

Software Engineering · Computer Science 2022-05-11 Todd Wareham , Marieke Sweers

Process mining involves discovering, monitoring, and improving real processes by extracting knowledge from event logs in information systems. Process mining has become an important topic in recent years, as evidenced by a growing number of…

Software Engineering · Computer Science 2021-04-01 Sabah Al-Fedaghi

Enzyme mining is rapidly evolving as a data-driven strategy to identify biocatalysts with tailored functions from the vast landscape of uncharacterized proteins. The integration of machine learning into these workflows enables…

Biomolecules · Quantitative Biology 2025-07-11 Yanzi Zhang , Felix Moorhoff , Sizhe Qiu , Wenjuan Dong , David Medina-Ortiz , Jing Zhao , Mehdi D. Davari

This study aims to integrate, clean and analysis through automated data mining techniques. Using data mining (DM) techniques is one of the processes of transferring raw data from current educational system to meaningful information that can…

Computers and Society · Computer Science 2019-09-04 Tajul Rosli Razak , Abdul Hapes Mohammed , Noorfaizalfarid Mohd Noor , Muhamad Arif Hashim

Software systems can be represented as graphs, capturing dependencies among functions and processes. An interesting aspect of software systems is that they can be represented as different types of graphs, depending on the extraction goals…

Machine Learning · Computer Science 2025-10-14 Kartikeya Aneja , Nagender Aneja , Murat Kantarcioglu

Protein function prediction is a pivotal task in drug discovery, significantly impacting the development of effective and safe therapeutics. Traditional machine learning models often struggle with the complexity and variability inherent in…

Machine Learning · Computer Science 2024-09-24 Bohao Xu , Yingzhou Lu , Yoshitaka Inoue , Namkyeong Lee , Tianfan Fu , Jintai Chen

This article presents a Unified Architecture for automated point tagging of Building Automation System data, based on a combination of data-driven approaches. Advanced energy analytics applications-including fault detection and diagnostics…

Computers and Society · Computer Science 2020-09-16 Sakshi Mishra , Andrew Glaws , Dylan Cutler , Stephen Frank , Muhammad Azam , Farzam Mohammadi , Jean-Simon Venne

Deep learning has achieved great success in a wide spectrum of multimedia applications such as image classification, natural language processing and multimodal data analysis. Recent years have seen the development of many deep learning…

Machine Learning · Computer Science 2021-08-06 Naili Xing , Sai Ho Yeung , Chenghao Cai , Teck Khim Ng , Wei Wang , Kaiyuan Yang , Nan Yang , Meihui Zhang , Gang Chen , Beng Chin Ooi

In this paper, we propose a selfdistillation framework with meta learning(MetaSD) for knowledge graph completion with dynamic pruning, which aims to learn compressed graph embeddings and tackle the longtail samples. Specifically, we first…

Computation and Language · Computer Science 2023-05-23 Yunshui Li , Junhao Liu , Chengming Li , Min Yang

Diffusion models (DMs) have demonstrated exceptional generative capabilities across various domains, including image, video, and so on. A key factor contributing to their effectiveness is the high quantity and quality of data used during…

Computer Vision and Pattern Recognition · Computer Science 2025-03-03 Qianlong Xiang , Miao Zhang , Yuzhang Shang , Jianlong Wu , Yan Yan , Liqiang Nie

Process mining represents an important field in BPM and data mining research. Recently, it has gained importance also for practitioners: more and more companies are creating business process intelligence solutions. The evaluation of process…

Software Engineering · Computer Science 2016-07-29 Andrea Burattin

Retrieval-augmented generation (RAG) systems are widely used in question-answering (QA) tasks, but current benchmarks lack metadata integration, limiting their evaluation in scenarios requiring both textual data and external information. To…

Information Retrieval · Computer Science 2026-02-13 Davide Bruni , Marco Avvenuti , Nicola Tonellotto , Maurizio Tesconi

We propose an extension of the Cross Industry Standard Process for Data Mining (CRISPDM) which addresses specific challenges of machine learning and data mining for context and model reuse handling. This new general context-aware process…

Production software oftentimes suffers from the issue of performance inefficiencies caused by inappropriate use of data structures, programming abstractions, and conservative compiler optimizations. It is desirable to avoid unnecessary…

Machine Learning · Computer Science 2020-11-20 Yixin Guo , Pengcheng Li , Yingwei Luo , Xiaolin Wang , Zhenlin Wang

This work introduces a new software package `Sesame' for the numerical computation of classical semiconductor equations. It supports 1 and 2-dimensional systems and provides tools to easily implement extended defects such as grain…

Applied Physics · Physics 2019-05-01 Benoit Gaury , Yubo Sun , Peter Bermel , Paul M. Haney

In this paper, the author aims to establish a mathematical model for a mimic computer. To this end, a novel automaton is proposed. First, a one-dimensional cellular automaton is used for expressing some dynamic changes in the structure of a…

Formal Languages and Automata Theory · Computer Science 2017-03-07 Weijun Zhu

In enterprise settings, efficiently retrieving relevant information from large and complex knowledge bases is essential for operational productivity and informed decision-making. This research presents a systematic empirical framework for…

Robotic Process Automation (RPA) systems face challenges in handling complex processes and diverse screen layouts that require advanced human-like decision-making capabilities. These systems typically rely on pixel-level encoding through…

Robotics · Computer Science 2024-05-22 Arushi Jain , Shubham Paliwal , Monika Sharma , Lovekesh Vig , Gautam Shroff