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Microscopy enables direct observation of cellular morphology in 3D, with transmitted-light methods offering low-cost, minimally invasive imaging and fluorescence microscopy providing specificity and contrast. Virtual staining combines these…

Nowadays, modern electron microscopes deliver images at atomic scale. The precise atomic structure encodes information about material properties. Thus, an important ingredient in the image analysis is to locate the centers of the atoms…

Computer Vision and Pattern Recognition · Computer Science 2017-09-13 Benjamin Berkels , Benedikt Wirth

We present a new algorithm for estimating the Point Spread Function (PSF) in wide-field astronomical images with extreme source crowding. Robust and accurate PSF estimation in crowded astronomical images dramatically improves the fidelity…

Image and Video Processing · Electrical Eng. & Systems 2021-02-09 Brendt Wohlberg , Przemek Wozniak

Super-resolution imaging using sub-diffraction field localization by micron sized transparent beads (microspheres) was recently demonstrated [1]. Practical applications in microscopy require control over the positioning of the microspheres.…

Optics · Physics 2013-12-25 Leonid A. Krivitsky , Jia Jun Wang , Zengbo Wang , Boris Lukiyanchuk

Diffusion magnetic resonance imaging (dMRI) is a crucial non-invasive technique for exploring the microstructure of the living human brain. Traditional hand-crafted and model-based tissue microstructure reconstruction methods often require…

Image and Video Processing · Electrical Eng. & Systems 2025-02-26 Xinrui Ma , Jian Cheng , Wenxin Fan , Ruoyou Wu , Yongquan Ye , Shanshan Wang

Reconstructing the 3D location and size of microparticles from diffraction images - holograms - is a computationally expensive inverse problem that has traditionally been solved using physics-based reconstruction methods. More recently,…

Computer Vision and Pattern Recognition · Computer Science 2025-03-17 Ayush Paliwal , Oliver Schlenczek , Birte Thiede , Manuel Santos Pereira , Katja Stieger , Eberhard Bodenschatz , Gholamhossein Bagheri , Alexander Ecker

Transformer-based methods have swept the benchmarks on 2D and 3D detection on images. Because tokenization before the attention mechanism drops the spatial information, positional encoding becomes critical for those methods. Recent works…

Computer Vision and Pattern Recognition · Computer Science 2023-07-31 Changyong Shu , JIajun Deng , Fisher Yu , Yifan Liu

Super-Resolution Ultrasound (SRUS) imaging through localising and tracking microbubbles, also known as Ultrasound Localisation Microscopy (ULM), has demonstrated significant potential for reconstructing microvasculature and flows with…

Image and Video Processing · Electrical Eng. & Systems 2025-03-26 Jipeng Yan , Qingyuan Tan , Shusei Kawara , Jingwen Zhu , Bingxue Wang , Matthieu Toulemonde , Honghai Liu , Ying Tan , Meng-Xing Tang

This study addresses the challenge of performing visual localization in demanding conditions such as night-time scenarios, adverse weather, and seasonal changes. While many prior studies have focused on improving image-matching performance…

Computer Vision and Pattern Recognition · Computer Science 2024-03-21 Khang Truong Giang , Soohwan Song , Sungho Jo

Beam alignment enables efficient, stable transmission and control of optical energy and information, which critically depend on precise monitoring and regulation of the three-dimensional (3D) relative positioning between fibers. This study…

Optics · Physics 2025-11-27 Lin Xu , Li Pei , Jianshuai Wang , Zhouyi Hu , Tigang Ning

Image stitching aim to align two images taken from different viewpoints into one seamless, wider image. However, when the 3D scene contains depth variations and the camera baseline is significant, noticeable parallax occurs-meaning the…

Computer Vision and Pattern Recognition · Computer Science 2025-12-25 Muhua Zhu , Xinhao Jin , Chengbo Wang , Yongcong Zhang , Yifei Xue , Tie Ji , Yizhen Lao

We extend Regularised Diffusion-Shock (RDS) filtering from Euclidean space $\mathbb{R}_2$ [1] to position-orientation space $\mathbb{M}_2 \cong \mathbb{R}^2 \times S^1$. This has numerous advantages, e.g. making it possible to enhance and…

Differential Geometry · Mathematics 2026-03-20 Finn M. Sherry , Kristina Schaefer , Remco Duits

Objective: The computation of anatomical information and laparoscope position is a fundamental block of surgical navigation in Minimally Invasive Surgery (MIS). Recovering a dense 3D structure of surgical scene using visual cues remains a…

Computer Vision and Pattern Recognition · Computer Science 2022-11-29 Ruofeng Wei , Bin Li , Hangjie Mo , Bo Lu , Yonghao Long , Bohan Yang , Qi Dou , Yunhui Liu , Dong Sun

The accuracy in the photometry of a point source depends on the point-spread function (PSF), detector pixelization, and observing strategy. The PSF and pixel response describe the spatial blurring of the source, the pixel scale describes…

Instrumentation and Methods for Astrophysics · Physics 2012-02-02 Johan Samsing , Alex G. Kim

In Ultrasound Localization Microscopy (ULM), achieving high-resolution images relies on the precise localization of contrast agent particles across a series of beamformed frames. However, our study uncovers an enormous potential: The…

Computational Geometry · Computer Science 2024-04-09 Christopher Hahne , Georges Chabouh , Arthur Chavignon , Olivier Couture , Raphael Sznitman

Scanning X-ray nanodiffraction microscopy is a powerful technique for spatially resolving nanoscale structural morphologies by diffraction contrast. One of the critical challenges in experimental nanodiffraction data analysis is posed by…

Applied Physics · Physics 2024-06-26 Aileen Luo , Tao Zhou , Martin V. Holt , Andrej Singer , Mathew J. Cherukara

Landslide monitoring is essential for understanding geohazards and mitigating associated risks. Existing point cloud-based methods, however, typically rely on either geometric or radiometric information and often yield sparse or non-3D…

Computer Vision and Pattern Recognition · Computer Science 2026-01-12 Zhaoyi Wang , Jemil Avers Butt , Shengyu Huang , Tomislav Medic , Andreas Wieser

Methods of three-dimensional deconvolution with a point-spread function as frequently employed in optical microscopy to reconstruct true three-dimensional distribution of objects are extended to holographic reconstructions. Two such schemes…

Optics · Physics 2017-08-09 Tatiana Latychevskaia , Fabian Gehri , Hans-Werner Fink

Colloidoscope is a deep learning pipeline employing a 3D residual Unet architecture, designed to enhance the tracking of dense colloidal suspensions through confocal microscopy. This methodology uses a simulated training dataset that…

In recent years, the usefulness of 3D shape estimation is being realized in microscopic or close-range imaging, as the 3D information can further be used in various applications. Due to limited depth of field at such small distances, the…

Computer Vision and Pattern Recognition · Computer Science 2017-01-02 Arnav Bhavsar