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The AHU-algorithm solves the computationally difficult graph isomorphism problem for rooted trees, and does so with a linear time complexity. Although the AHU-algorithm has remained state of the art for almost 50 years, it has been…

Computational Complexity · Computer Science 2024-01-17 Anna Lindeberg

A word-representable graph is a simple graph $G$ which can be represented by a word $w$ over the vertices of $G$ such that any two vertices are adjacent in $G$ if and only if they alternate in $w$. It is known that the class of…

Discrete Mathematics · Computer Science 2021-09-09 Khyodeno Mozhui , K. V. Krishna

Graphlets are subgraphs rooted at a fixed vertex. The number of occurrences of graphlets aligned to a particular vertex, called graphlet degree sequence (gds), gives a topological description of the surrounding of the analyzed vertex.…

Combinatorics · Mathematics 2026-01-01 David Hartman , Aneta Pokorná , Daniel Trlifaj , Lluís Vena

Modeling and generating graphs is fundamental for studying networks in biology, engineering, and social sciences. However, modeling complex distributions over graphs and then efficiently sampling from these distributions is challenging due…

Machine Learning · Computer Science 2018-06-26 Jiaxuan You , Rex Ying , Xiang Ren , William L. Hamilton , Jure Leskovec

Graph, as an important data representation, is ubiquitous in many real world applications ranging from social network analysis to biology. How to correctly and effectively learn and extract information from graph is essential for a large…

Machine Learning · Computer Science 2020-10-27 Xiaodong Jiang , Ronghang Zhu , Pengsheng Ji , Sheng Li

Graph convolution is a recent scalable method for performing deep feature learning on attributed graphs by aggregating local node information over multiple layers. Such layers only consider attribute information of node neighbors in the…

Machine Learning · Computer Science 2022-07-04 Tsuyoshi Murata , Naveed Afzal

Finding roots of equations is at the heart of most computational science. A well-known and widely used iterative algorithm is the Newton's method. However, its convergence depends heavily on the initial guess, with poor choices often…

Numerical Analysis · Mathematics 2020-04-09 Ankush Aggarwal , Sanjay Pant

Graph coarsening is a graph dimensionality reduction technique that aims to construct a smaller and more tractable graph while preserving the essential structural and semantic properties of the original graph. However, most existing methods…

Machine Learning · Computer Science 2026-05-14 Xu Bai , Bin Lu , Kun Zhang , Shengbo Chen , Xinbing Wang , Chenghu Zhou , Meng Jin

The Subgraph Isomorphism problem asks, given a host graph G on n vertices and a pattern graph P on k vertices, whether G contains a subgraph isomorphic to P. The restriction of this problem to planar graphs has often been considered. After…

Discrete Mathematics · Computer Science 2015-03-19 Paul Bonsma

Grid graphs, and, more generally, $k\times r$ grid graphs, form one of the most basic classes of geometric graphs. Over the past few decades, a large body of works studied the (in)tractability of various computational problems on grid…

Data Structures and Algorithms · Computer Science 2021-07-01 Siddharth Gupta , Guy Sa'ar , Meirav Zehavi

Graph reordering is a powerful technique to increase the locality of the representations of graphs, which can be helpful in several applications. We study how the technique can be used to improve compression of graphs and inverted indexes.…

Data Structures and Algorithms · Computer Science 2017-09-04 Laxman Dhulipala , Igor Kabiljo , Brian Karrer , Giuseppe Ottaviano , Sergey Pupyrev , Alon Shalita

Graphs are a generalized concept that encompasses more complex data structures than trees, such as difference lists, doubly-linked lists, skip lists, and leaf-linked trees. Normally, these structures are handled with destructive assignments…

Programming Languages · Computer Science 2022-09-13 Jin Sano , Naoki Yamamoto , Kazunori Ueda

Treewidth is a measure of how tree-like a graph is. It has many important algorithmic applications because many NP-hard problems on general graphs become tractable when restricted to graphs of bounded treewidth. Algorithms for problems on…

Data Structures and Algorithms · Computer Science 2020-06-03 Johan M. M. van Rooij

In this paper we discuss reconstruction problems for graphs. We develop some new ideas like isomorphic extension of isomorphic graphs, partitioning of vertex sets into sets of equivalent points, subdeck property, etc. and develop an…

General Mathematics · Mathematics 2011-10-21 Dhananjay P. Mehendale

Recently, the paradigm of pre-training and fine-tuning graph neural networks has been intensively studied and applied in a wide range of graph mining tasks. Its success is generally attributed to the structural consistency between…

Machine Learning · Computer Science 2023-12-22 Yifei Sun , Qi Zhu , Yang Yang , Chunping Wang , Tianyu Fan , Jiajun Zhu , Lei Chen

Graph pattern matching algorithms to handle million-scale dynamic graphs are widely used in many applications such as social network analytics and suspicious transaction detections from financial networks. On the other hand, the computation…

Databases · Computer Science 2019-07-10 Hiroki Kanezashi , Toyotaro Suzumura , Dario Garcia-Gasulla , Min-hwan Oh , Satoshi Matsuoka

We define an algorithm k which takes a connected graph G on a totally ordered vertex set and returns an increasing tree R (which is not necessarily a subtree of G). We characterize the set of graphs G such that k(G)=R. Because this set has…

Combinatorics · Mathematics 2007-05-23 Gus Wiseman

Graph foundation models represent a transformative paradigm for learning transferable representations across diverse graph domains. Recent methods leverage large language models to unify graph and text modalities into a shared…

Machine Learning · Computer Science 2025-12-23 Heng Zhang , Tianyi Zhang , Yuling Shi , Xiaodong Gu , Yaomin Shen , Haochen You , Zijian Zhang , Yilei Yuan , Jin Huang

Graph Edit Distance (GED) is defined as the minimum cost transformation of one graph into another and is a widely adopted metric for measuring the dissimilarity between graphs. The major problem of GED is that its computation is NP-hard,…

Machine Learning · Computer Science 2026-02-24 Francesco Leonardi , Markus Orsi , Jean-Louis Reymond , Kaspar Riesen

A vertex $v$ of a connected graph $G$ is said to be a boundary vertex of $G$ if for some other vertex $u$ of $G$, no neighbor of $v$ is further away from $u$ than $v$. The boundary $\partial(G)$ of $G$ is the set of all of its boundary…

Combinatorics · Mathematics 2024-12-30 José Cáceres , Ignacio M. Pelayo