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We present an approach to implement binary search trees in the rule-based graph programming language GP 2. Our implementation uses GP 2's rooted graph transformation rules to be fast and supports insertion, deletion and query operations. We…

Programming Languages · Computer Science 2026-01-08 Ziad Ismaili Alaoui , Detlef Plump

Modularity is a very widely used measure of the level of clustering or community structure in networks. Here we consider a recent generalisation of the definition of modularity to temporal graphs, whose edge-sets change over discrete…

Combinatorics · Mathematics 2025-07-24 Vilhelm Agdur , Jessica Enright , Laura Larios-Jones , Kitty Meeks , Fiona Skerman , Ella Yates

Refactoring is an essential activity during software evolution. Frequently, practitioners rely on such transformations to improve source code maintainability and quality. As a consequence, this process may produce new source code entities…

Software Engineering · Computer Science 2020-03-11 Aline Brito , Andre Hora , Marco Tulio Valente

With the advent of the big data, graph are processed in an iterative manner, which incrementally described in the form of graph in big data applications. Most currently, graph processing methods treat the underlying map data as black boxes.…

Distributed, Parallel, and Cluster Computing · Computer Science 2018-06-05 Beibei Si

The presented material is devoted to the equivalent conversion from the vertex graphs to the edge graphs. We suggest that the proved theorems solve the problem of the isomorphism of graphs, the problem of the graph's enumeration with the…

Computational Complexity · Computer Science 2012-10-22 Leonid Malinin , Natalia Malinina

Over the past decade, we witness an increasing amount of interest in the design of exact exponential-time and parameterized algorithms for problems in Graph Drawing. Unfortunately, we still lack knowledge of general methods to develop such…

Data Structures and Algorithms · Computer Science 2023-10-10 Siddharth Gupta , Guy Sa'ar , Meirav Zehavi

The k-th power D^k of a directed graph D is defined to be the directed graph on the vertices of D with an arc from a to b in D^k iff one can get from a to b in D with exactly k steps. This notion is equivalent to the k-fold composition of…

Combinatorics · Mathematics 2007-05-23 Martin Kutz

This paper presents a new graph isomorphism invariant, called $\mathfrak{w}$-labeling, that can be used to design a polynomial-time algorithm for solving the graph isomorphism problem for various graph classes. For example, all…

Data Structures and Algorithms · Computer Science 2023-01-24 Alpár Jüttner , Péter Madarasi

In order to define graph transformations by the simultaneous application of concurrent rules, we have adopted in previous work a structure of attributed graphs stable by unions. We analyze the consequences on parallel independence, a…

Logic in Computer Science · Computer Science 2021-02-05 Thierry Boy de la Tour

Graphs are a natural representation for systems based on relations between connected entities. Combinatorial optimization problems, which arise when considering an objective function related to a process of interest on discrete structures,…

Machine Learning · Computer Science 2024-08-21 Victor-Alexandru Darvariu , Stephen Hailes , Mirco Musolesi

Given a graph $G$, a vertex switch of $v \in V(G)$ results in a new graph where neighbors of $v$ become nonneighbors and vice versa. This operation gives rise to an equivalence relation over the set of labeled digraphs on $n$ vertices. The…

Data Structures and Algorithms · Computer Science 2014-08-22 Nathan Lindzey

Given an undirected graph G, the edge orientation problem asks for assigning a direction to each edge to convert G into a directed graph. The aim is to minimize the maximum out degree of a vertex in the resulting directed graph. This…

Data Structures and Algorithms · Computer Science 2024-04-23 H. Reinstädtler , C. Schulz , B. Uçar

Generative models of graph structure have applications in biology and social sciences. The state of the art is GraphRNN, which decomposes the graph generation process into a series of sequential steps. While effective for modest sizes, it…

Machine Learning · Computer Science 2019-10-18 Tony Duan , Juho Lee

Combining tree decomposition and transfer matrix techniques provides a very general algorithm for computing exact partition functions of statistical models defined on arbitrary graphs. The algorithm is particularly efficient in the case of…

Mathematical Physics · Physics 2015-05-18 Andrea Bedini , Jesper Lykke Jacobsen

Graph Neural Networks (GNNs) rely on graph convolutions to exploit meaningful patterns in networked data. Based on matrix multiplications, convolutions incur in high computational costs leading to scalability limitations in practice. To…

Machine Learning · Computer Science 2022-10-28 Juan Cervino , Luana Ruiz , Alejandro Ribeiro

We investigate graph transformations, defined using Datalog-like rules based on acyclic conjunctive two-way regular path queries (acyclic C2RPQs), and we study two fundamental static analysis problems: type checking and equivalence of…

Databases · Computer Science 2023-04-21 Iovka Boneva , Benoit Groz , Jan Hidders , Filip Murlak , Slawomir Staworko

The notion of directed treewidth was introduced by Johnson, Robertson, Seymour and Thomas [Journal of Combinatorial Theory, Series B, Vol 82, 2001] as a first step towards an algorithmic metatheory for digraphs. They showed that some…

Data Structures and Algorithms · Computer Science 2015-10-09 Mateus de Oliveira Oliveira

Tree-width and path-width are well-known graph parameters. Many NP-hard graph problems allow polynomial-time solutions, when restricted to graphs of bounded tree-width or bounded path-width. In this work, we study the behavior of tree-width…

Data Structures and Algorithms · Computer Science 2024-06-14 Frank Gurski , Robin Weishaupt

A monotone drawing of a graph G is a straight-line drawing of G such that every pair of vertices is connected by a path that is monotone with respect to some direction. Trees, as a special class of graphs, have been the focus of several…

Data Structures and Algorithms · Computer Science 2025-05-19 Anargyros Oikonomou , Antonios Symvonis

Graph Neural Networks (GNNs) have achieved remarkable success in various real-world applications. However, GNNs may be trained on undesirable graph data, which can degrade their performance and reliability. To enable trained GNNs to…

Machine Learning · Computer Science 2024-03-14 Jiahao Zhang , Lin Wang , Shijie Wang , Wenqi Fan