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Unstructured information in electronic health records provide an invaluable resource for medical research. To protect the confidentiality of patients and to conform to privacy regulations, de-identification methods automatically remove…

Computation and Language · Computer Science 2020-01-17 Jan Trienes , Dolf Trieschnigg , Christin Seifert , Djoerd Hiemstra

The de-identification of private information in medical data is a crucial process to mitigate the risk of confidentiality breaches, particularly when patient personal details are not adequately removed before the release of medical records.…

Cryptography and Security · Computer Science 2025-04-29 Guanchen Wu , Linzhi Zheng , Han Xie , Zhen Xiang , Jiaying Lu , Darren Liu , Delgersuren Bold , Bo Li , Xiao Hu , Carl Yang

Physician burnout in the United States has reached critical levels, driven in part by the administrative burden of Electronic Health Record (EHR) documentation and complex diagnostic codes. To relieve this strain and maintain strict patient…

Information Retrieval · Computer Science 2026-03-25 Peter Hartnett , Chung-Chi Huang , Sarah Hartnett , David Hartnett

Natural Language Processing (NLP) techniques can be applied to help with the diagnosis of medical conditions such as depression, using a collection of a person's utterances. Depression is a serious medical illness that can have adverse…

Computation and Language · Computer Science 2022-06-17 Priyam Basu , Tiasa Singha Roy , Rakshit Naidu , Zumrut Muftuoglu , Sahib Singh , Fatemehsadat Mireshghallah

We present a system that uses a learned autocompletion mechanism to facilitate rapid creation of semi-structured clinical documentation. We dynamically suggest relevant clinical concepts as a doctor drafts a note by leveraging features from…

Machine Learning · Computer Science 2020-07-31 Divya Gopinath , Monica Agrawal , Luke Murray , Steven Horng , David Karger , David Sontag

Effective clinical history taking is a foundational yet underexplored component of clinical reasoning. While large language models (LLMs) have shown promise on static benchmarks, they often fall short in dynamic, multi-turn diagnostic…

Computation and Language · Computer Science 2026-01-30 Yang Zhou , Zhenting Sheng , Mingrui Tan , Yuting Song , Jun Zhou , Yu Heng Kwan , Lian Leng Low , Yang Bai , Yong Liu

The clinical time-series setting poses a unique combination of challenges to data modeling and sharing. Due to the high dimensionality of clinical time series, adequate de-identification to preserve privacy while retaining data utility is…

Synthetic health data have the potential to mitigate privacy concerns when sharing data to support biomedical research and the development of innovative healthcare applications. Modern approaches for data generation based on machine…

Machine Learning · Computer Science 2023-01-11 Chao Yan , Yao Yan , Zhiyu Wan , Ziqi Zhang , Larsson Omberg , Justin Guinney , Sean D. Mooney , Bradley A. Malin

The challenge of accessing historical patient data for clinical research, while adhering to privacy regulations, is a significant obstacle in medical science. An innovative approach to circumvent this issue involves utilising synthetic…

Computation and Language · Computer Science 2024-03-15 Erlend Frayling , Jake Lever , Graham McDonald

Unstructured textual data are at the heart of health systems: liaison letters between doctors, operating reports, coding of procedures according to the ICD-10 standard, etc. The details included in these documents make it possible to get to…

Cryptography and Security · Computer Science 2023-10-09 Yakini Tchouka , Jean-François Couchot , Maxime Coulmeau , David Laiymani , Philippe Selles , Azzedine Rahmani

We present an approach for generating differentially private synthetic text using large language models (LLMs), via private prediction. In the private prediction framework, we only require the output synthetic data to satisfy differential…

Machine Learning · Computer Science 2024-10-10 Kareem Amin , Alex Bie , Weiwei Kong , Alexey Kurakin , Natalia Ponomareva , Umar Syed , Andreas Terzis , Sergei Vassilvitskii

Access to genomic data is highly regulated due to its sensitive nature. While safeguards are essential, cumbersome data access processes pose a significant barrier to the development of AI methods for genomics. Synthetic data generation can…

Cryptography and Security · Computer Science 2026-05-01 Daniil Filienko , Martine De Cock , Sikha Pentyala

Synthetic data has been hailed as the silver bullet for privacy preserving data analysis. If a record is not real, then how could it violate a person's privacy? In addition, deep-learning based generative models are employed successfully to…

Machine Learning · Computer Science 2023-07-14 Benedikt Groß , Gerhard Wunder

Synthetic tabular data generation with differential privacy is a crucial problem to enable data sharing with formal privacy. Despite a rich history of methodological research and development, developing differentially private tabular data…

Machine Learning · Computer Science 2024-06-05 Toan V. Tran , Li Xiong

Differentially private data generation techniques have become a promising solution to the data privacy challenge -- it enables sharing of data while complying with rigorous privacy guarantees, which is essential for scientific progress in…

Cryptography and Security · Computer Science 2022-11-09 Dingfan Chen , Raouf Kerkouche , Mario Fritz

Synthetic medical data which preserves privacy while maintaining utility can be used as an alternative to real medical data, which has privacy costs and resource constraints associated with it. At present, most models focus on generating…

Machine Learning · Computer Science 2019-11-28 Saloni Dash , Ritik Dutta , Isabelle Guyon , Adrien Pavao , Andrew Yale , Kristin P. Bennett

We explore how private synthetic text can be generated by suitably prompting a large language model (LLM). This addresses a challenge for organizations like hospitals, which hold sensitive text data like patient medical records, and wish to…

Computation and Language · Computer Science 2025-02-20 Supriya Nagesh , Justin Y. Chen , Nina Mishra , Tal Wagner

A large percentage of medical information is in unstructured text format in electronic medical record systems. Manual extraction of information from clinical notes is extremely time consuming. Natural language processing has been widely…

Information Retrieval · Computer Science 2019-08-16 Dianbo Liu , Dmitriy Dligach , Timothy Miller

Training generative machine learning models to produce synthetic tabular data has become a popular approach for enhancing privacy in data sharing. As this typically involves processing sensitive personal information, releasing either the…

Cryptography and Security · Computer Science 2026-02-02 Georgi Ganev , Emiliano De Cristofaro

Clinical notes contain an extensive record of a patient's health status, such as smoking status or the presence of heart conditions. However, this detail is not replicated within the structured data of electronic health systems.…

Computation and Language · Computer Science 2020-09-18 Andriy Mulyar , Elliot Schumacher , Masoud Rouhizadeh , Mark Dredze
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