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Graph Neural Networks (GNNs) have shown success in many real-world applications that involve graph-structured data. Most of the existing single-node GNN training systems are capable of training medium-scale graphs with tens of millions of…

Distributed, Parallel, and Cluster Computing · Computer Science 2023-03-02 Yi-Chien Lin , Viktor Prasanna

We present pkdgrav3, a high-performance, fully parallel tree-SPH code designed for large-scale hydrodynamic simulations including self-gravity. Building upon the long development history of pkdgrav, the code combines an efficient…

Earth and Planetary Astrophysics · Physics 2026-05-14 Thomas Meier , Douglas Potter , Christian Reinhardt , Joachim Stadel

The Knights Landing (KNL) is the codename for the latest generation of Intel processors based on Intel Many Integrated Core (MIC) architecture. It relies on massive thread and data parallelism, and fast on-chip memory. This processor…

Distributed, Parallel, and Cluster Computing · Computer Science 2018-04-06 Enrico Calore , Alessandro Gabbana , Sebastiano Fabio Schifano , Raffaele Tripiccione

We discuss the design and implementation of HYDRA_OMP a parallel implementation of the Smoothed Particle Hydrodynamics-Adaptive P3M (SPH-AP3M) code HYDRA. The code is designed primarily for conducting cosmological hydrodynamic simulations…

Astrophysics · Physics 2009-11-11 R. J. Thacker , H. M. P. Couchman

Improving single-thread performance remains a critical challenge in modern processor design, as conventional approaches such as deeper speculation, wider pipelines, and complex out-of-order execution face diminishing returns. This work…

Performance · Computer Science 2025-10-01 Shayne Wadle , Karthikeyan Sankaralingam

Parallel p-bit Ising machines are a promising platform for fast and energy-efficient combinatorial optimization, but their scalability depends on update synchronization, hardware delay, and architectural cost. In this work, we establish a…

Emerging Technologies · Computer Science 2026-04-03 Naoya Onizawa , Takahiro Hanyu

Scientific applications continue to rely on legacy Fortran codebases originally developed for homogeneous, CPU-based systems. As High-Performance Computing (HPC) shifts toward heterogeneous GPU-accelerated architectures, many accelerators…

Software Engineering · Computer Science 2025-11-19 Sparsh Gupta , Kamalavasan Kamalakkannan , Maxim Moraru , Galen Shipman , Patrick Diehl

We present the extension of the Tinker-HP package (Lagard\`ere et al., Chem. Sci., 2018,9, 956-972) to the use of Graphics Processing Unit (GPU) cards to accelerate molecular dynamics simulations using polarizable many-body force fields.…

The Athena Startup Kit (ASK), is an interactive front-end to the Atlas software framework (ATHENA). Written in python, a very effective "glue" language, it is build on top of the, in principle unrelated, code repository, build,…

Software Engineering · Computer Science 2007-05-23 W. T. L. P. Lavrijsen

Exascale High Performance Computing (HPC) represents a tremendous opportunity to push the boundaries of Computational Fluid Dynamics (CFD), but despite the consolidated trend towards the use of Graphics Processing Units (GPUs),…

Monte Carlo / Dynamic Code (MC/DC) is a portable Monte Carlo neutron transport package for rapid numerical methods exploration in heterogeneous and HPC contexts, developed under the auspices of the Center for Exascale Monte Carlo Neutron…

Computational Physics · Physics 2025-06-03 Braxton Cuneo , Joanna Piper Morgan , Ilham Variansyah , Kyle E. Niemeyer

Online analytical processing of queries on datasets in the many-terabyte range is only possible with costly distributed computing systems. To decrease the cost and increase the throughput, systems can leverage accelerators such as GPUs,…

In this paper, we address some of the key limitations to realizing a generic heterogeneous parallel programming model for quantum-classical heterogeneous platforms. We discuss our experience in enabling user-level multi-threading in QCOR as…

GAMER, a parallel Graphic-processing-unit-accelerated Adaptive-MEsh-Refinement hydrodynamic code, has been extended to support magnetohydrodynamics (MHD) with both the corner-transport-upwind (CTU) and MUSCL-Hancock schemes and the…

Computational Physics · Physics 2018-06-22 Ui-Han Zhang , Hsi-Yu Schive , Tzihong Chiueh

We describe the first parallel implementation of an adaptive particle-particle, particle-mesh code with smoothed particle hydrodynamics. Parallelisation of the serial code, ``Hydra'', is achieved by using CRAFT, a Cray proprietary language…

Astrophysics · Physics 2009-10-30 F. R. Pearce , H. M. P. Couchman

Energy-efficiency has become a major challenge in modern computer systems. To address this challenge, candidate systems increasingly integrate heterogeneous cores in order to satisfy diverse computation requirements by selecting cores with…

Distributed, Parallel, and Cluster Computing · Computer Science 2019-02-07 Anastasiia Butko , Florent Bruguier , David Novo , Abdoulaye Gamatié , Gilles Sassatelli

State of art DL models are growing in size and complexity, with many modern models also increasing in heterogeneity of behavior. GPUs are still the dominant platform for DL applications, relying on a bulk-synchronous execution model which…

Hardware Architecture · Computer Science 2025-02-26 Michael Davies , Neal Crago , Karthikeyan Sankaralingam , Stephen W. Keckler

We present the extension of the differentiable hydrodynamics code, diffhydro, enabling scalable PDE-constrained inference and integrated hybrid physics-ML models for a wide range of astrophysical applications. New physics additions include…

Instrumentation and Methods for Astrophysics · Physics 2025-12-16 Benjamin Horowitz , Zarija Lukić , Kentaro Nagamine , Yuri Oku

In the push for exascale computing, energy efficiency is of utmost concern. System architectures often adopt accelerators to hasten application execution at the cost of power. The Intel Xeon Phi co-processor is unique accelerator that…

Distributed, Parallel, and Cluster Computing · Computer Science 2015-05-26 Gary Lawson , Masha Sosonkina , Yuzhong Shen

This work discusses the performance of a modern numerical scheme for fluid dynamical problems on modern high-performance computing architectures. Our code implements a spatial nodal discontinuous Galerkin scheme that we test up to an order…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-10-08 Filipp Sporykhin , Holger Homann
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