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In this work we present a performance exploration on Eager K-truss, a linear-algebraic formulation of the K-truss graph algorithm. We address performance issues related to load imbalance of parallel tasks in symmetric, triangular graphs by…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-09-18 Mark Blanco , Tze Meng Low , Kyungjoo Kim

We present an architecture-algorithm co-design study of the Optimistic Quantum Fourier Transform (OQFT) under a surface-code fault-tolerant execution model for reconfigurable neutral-atom hardware. Analyzing the OQFT structure, particularly…

Quantum Physics · Physics 2026-05-18 Pedro L. S. Lopes

Sparse Matrix-Matrix multiplication is a key kernel that has applications in several domains such as scientific computing and graph analysis. Several algorithms have been studied in the past for this foundational kernel. In this paper, we…

Distributed, Parallel, and Cluster Computing · Computer Science 2018-01-10 Mehmet Deveci , Christian Trott , Sivasankaran Rajamanickam

Matrix multiplication is a foundational operation in scientific computing and machine learning, yet its computational complexity makes it a significant bottleneck for large-scale applications. The shift to parallel architectures, primarily…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-07-30 Mufakir Qamar Ansari , Mudabir Qamar Ansari

With the advent of exascale computing, effective load balancing in massively parallel software applications is critically important for leveraging the full potential of high performance computing systems. Load balancing is the distribution…

Quantum Physics · Physics 2025-01-30 Omer Rathore , Alastair Basden , Nicholas Chancellor , Halim Kusumaatmaja

The ability to timely process significant amounts of continuously updated spatial data is mandatory for an increasing number of applications. In this paper we focus on a specific data-intensive problem concerning the repeated processing of…

Distributed, Parallel, and Cluster Computing · Computer Science 2014-12-22 Francesco Lettich , Salvatore Orlando , Claudio Silvestri

Portability is critical to ensuring high productivity in developing and maintaining scientific software as the diversity in on-node hardware architectures increases. While several programming models provide portability for diverse GPU…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-09-08 Joshua H. Davis , Pranav Sivaraman , Joy Kitson , Konstantinos Parasyris , Harshitha Menon , Isaac Minn , Giorgis Georgakoudis , Abhinav Bhatele

This article presents an automatic approach to quickly derive a good solution for hardware resource partition and task granularity for task-based parallel applications on heterogeneous many-core architectures. Our approach employs a…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-03-10 Peng Zhang , Jianbin Fang , Canqun Yang , Chun Huang , Tao Tang , Zheng Wang

The transition to the fault-tolerant era exposes the limitations of homogeneous quantum systems, where no single qubit modality simultaneously offers optimal operation speed, connectivity, and scalability. In this work, we propose a…

Quantum Physics · Physics 2026-01-16 Xiang Fang , Jixuan Ruan , Sharanya Prabhu , Ang Li , Travis Humble , Dean Tullsen , Yufei Ding

Numerical studies of shock waves in large scale systems via kinetic simulations with millions of particles are too computationally demanding to be processed in serial. In this work we focus on optimizing the parallel performance of a…

Computational Physics · Physics 2015-07-10 Jim Howell , Wolfgang Bauer , Dirk Colbry , Rodney Pickett , Alec Staber , Irina Sagert , Terrance Strother

We employ pressure point analysis and roofline modeling to identify performance bottlenecks and determine an upper bound on the performance of the Canonical Polyadic Alternating Poisson Regression Multiplicative Update (CP-APR MU) algorithm…

Distributed, Parallel, and Cluster Computing · Computer Science 2023-07-10 S. Isaac Geronimo Anderson , Keita Teranishi , Daniel M. Dunlavy , Jee Choi

High resolution simulations of polar ice-sheets play a crucial role in the ongoing effort to develop more accurate and reliable Earth-system models for probabilistic sea-level projections. These simulations often require a massive amount of…

Computational Engineering, Finance, and Science · Computer Science 2022-04-12 Jerry Watkins , Max Carlson , Kyle Shan , Irina Tezaur , Mauro Perego , Luca Bertagna , Carolyn Kao , Matthew J. Hoffman , Stephen F. Price

We perform a suite of two- and three-dimensional magnetohydrodynamic (MHD) simulations with the Athena code of the non-driven Kelvin-Helmholtz instability in the subsonic, weak magnetic field limit. Focusing the analysis on the non-linear…

High Energy Astrophysical Phenomena · Physics 2015-06-15 Greg Salvesen , Kris Beckwith , Jacob B. Simon , Sean M. O'Neill , Mitchell C. Begelman

ATHENA is an open source Python package for reduction in parameter space. It implements several advanced numerical analysis techniques such as Active Subspaces (AS), Kernel-based Active Subspaces (KAS), and Nonlinear Level-set Learning…

Numerical Analysis · Mathematics 2022-04-19 Francesco Romor , Marco Tezzele , Gianluigi Rozza

High-Performance Computing (HPC) systems provide input/output (IO) performance growing relatively slowly compared to peak computational performance and have limited storage capacity. Computational Fluid Dynamics (CFD) applications aiming to…

Performance · Computer Science 2024-07-31 Yi Ju , Adalberto Perez , Stefano Markidis , Philipp Schlatter , Erwin Laure

$k$-means has historically been positioned primarily as an offline processing primitive, typically used for dataset organization or embedding preprocessing rather than as a first-class component in online systems. In this work, we revisit…

Distributed, Parallel, and Cluster Computing · Computer Science 2026-04-13 Shuo Yang , Haocheng Xi , Yilong Zhao , Muyang Li , Xiaoze Fan , Jintao Zhang , Han Cai , Yujun Lin , Xiuyu Li , Kurt Keutzer , Song Han , Chenfeng Xu , Ion Stoica

We present the formulation, algorithm and numerical tests of the magnetohydrodynamic-particle-in-cell (MHD-PIC) method with particles treated under the guiding center approximation, which we term the MHD-gPIC method, and it is implemented…

High Energy Astrophysical Phenomena · Physics 2025-10-20 Zitao Hu , Xue-Ning Bai , Xiaochen Sun

We present efficient realization of Householder Transform (HT) based QR factorization through algorithm-architecture co-design where we achieve performance improvement of 3-90x in-terms of Gflops/watt over state-of-the-art multicore,…

Performance · Computer Science 2018-03-15 Farhad Merchant , Tarun Vatwani , Anupam Chattopadhyay , Soumyendu Raha , S K Nandy , Ranjani Narayan

The rapid growth of scientific data is surpassing advancements in computing, creating challenges in storage, transfer, and analysis, particularly at the exascale. While data reduction techniques such as lossless and lossy compression help…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-03-11 Jieyang Chen , Qian Gong , Yanliang Li , Xin Liang , Lipeng Wan , Qing Liu , Norbert Podhorszki , Scott Klasky

We present a portable platform, called PIC_ENGINE, for accelerating Particle-In-Cell (PIC) codes on heterogeneous many-core architectures such as Graphic Processing Units (GPUs). The aim of this development is efficient simulations on…

Computational Physics · Physics 2016-06-08 F. Hariri , T. M. Tran , A. Jocksch , E. Lanti , J. Progsch , P. Messmer , S. Brunner , G. Gheller , L. Villard